Scomber scombrus (Atlantic mackerel): 134003177
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Entry
134003177 CDS
T10651
Name
(RefSeq) scavenger receptor cysteine-rich type 1 protein M130-like
KO
K06545
CD163 antigen
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
CD molecules [BR:
ssco04090
]
Proteins
134003177
BRITE hierarchy
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Paralog
Gene cluster
GFIT
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NCBI-GeneID:
134003177
NCBI-ProteinID:
XP_062298288
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Position
21:complement(25057038..25082528)
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AA seq
1112 aa
AA seq
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MDHLLMVLVLLCSSGLQAEDDHQSETVRLVGGASRCAGTLEVKHGEWRPVSYSVWTLKEA
NVMCRYLDCGSALLTRSRYEVPKMSVWRLRPDCVRSGSALMDCVSSDSSNHIRELTCSDS
VRLVNGTSLCSGRLEVKSEQSWSSVCEADFDQQDADVVCRELDCGTSLVIQGALYGEVEA
PMWTKEFQCGGNESALLDCERSNSATRTCSPGKAVGLTCSEPFRLVGGASRCAGTLEVKQ
GVWRPLRYSDWTLNEADAICRNLDCGSAVSTRSRRLDSDRPVWVISSDCLRSGSARRSCV
SSSYLSSSILEITCSDSVRLVNGSRLCSGRLEVKSEQSWSSVCEADFDQQDAEVVCRELG
CGTPSVLQGALYGEVEAPMWTKEFQCGGHESALLDCRRSDSARRTCSPGKAVGLTCSDLH
PVRLVGGASRCAGTLELKHGEWRPVSYSDWTLKKADVLCRYLDCGSAVSIGSRNEASHRS
VWWIRSDCFLSESSLMDCVSSRSSSSIVELTCSDSVRLVNGTSLCSGRLEVKSEQSWSSV
CEPDFDQQDAEVVCRELGCGTPLVLQGALYGEVEAPMWTKEFQCGGNESALLDCRRSDSA
RRTCSPGKAVGLTCSPEPVRLVGGASRCAGTLEMKHGEWRPVSYSVWTLKEAAIICRHLD
CGSALSISSRNEYSYRSLWSISSDCVQSGSALRDCASSYSSYFIMEITCSDSVRLVNGTS
LCSGRLEVKSEQSWSSVCEADFDQQDAEVVCRQIDCGAPSVLQGALYGEVEAPMWTKEFQ
CGGNESALLDCRRSNSARRTCSPGKAVGLTCSEPVRLVGGASRCAGTLEVKYGEWRPVWY
YDWIPKDADVICRYLDCGSAVSTRSRDEASSRSTWWFRSDWLHSASDVRDCVFSYSSSSI
LELTCSDSVRLVNGTSLCSGRLEVKSEQTWSSVCEADFDQQDAEVVCRDLGCGAPSVLQG
ALYGEVEAPMWTKEFQCGGNESALLDCRRSNSTRRTCSPGKAVGLTCSDPVRLVGGASRC
AGTLELKYGEWRPVGGKFYDWTLKKADAICRSLDCGSAVSTGIRNVHSYRMSVWWISSEC
LQPGSALMDCASSSGSSSSILEITCSGCRGGL
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggatcacctgctgatggtgttggtgttgctgtgcagctcaggactccaggctgaagat
gatcaccaatcagagactgtcaggttggtgggaggagccagtcgctgtgcaggtacactg
gaggtgaaacatggagagtggagaccagtgagttactctgtctggaccctgaaggaagca
aatgtcatgtgtagatatctggactgtggctctgctcttttaacaagaagcagatatgag
gtcccaaagatgtctgtatggaggctcagaccagactgtgttcggtctggatctgcactg
atggactgtgtatcatcagattcttctaatcatatccgggagctcacctgctcagactct
gtcaggctggtgaatgggactagtctgtgttcaggcagactggaggtgaagtctgagcag
tcgtggtcctcagtgtgtgaagctgactttgaccagcaggatgcagatgtggtctgtagg
gagcttgactgtgggacttctttagtcatccagggggcactctatggagaagtggaggct
ccaatgtggaccaaagagttccagtgtggaggcaatgagtctgctctcctggactgtgaa
cgatcaaactcagctacaagaacctgctcacctggtaaagctgttggactcacctgctca
gagcctttcagattggtgggaggagccagtcgctgtgcaggtacactggaggtgaaacaa
ggagtgtggagaccattaagatactctgactggaccctgaatgaagcagatgcaatatgt
agaaatctggactgtggctctgctgtttcaacaagaagcagaaggctagactcagacaga
cctgtatgggtgatcagttctgactgtcttcgttctggatctgcacggaggagctgtgta
tcatcatcatatttatcgtcctccatcttggagatcacctgctcagactctgtcaggctg
gtgaatgggtctagactgtgttcaggcagactggaggtgaagtctgagcagtcgtggtcc
tcagtgtgtgaagctgactttgaccagcaggatgcagaggtggtctgtagggagcttggc
tgtgggactccttcagtcctccagggggcgctctatggagaagtggaggctccaatgtgg
accaaagagttccagtgtggaggccatgagtctgctctcctggactgtagaagatcagac
tcagctagaagaacctgctcacctggtaaagctgttggactcacctgctcagacctgcat
cctgtcaggttggtgggaggagccagtcgctgtgcaggtacactggagctgaaacatgga
gagtggagaccagtgagttactctgactggaccctgaagaaagcagacgtactatgtaga
tatttggactgtggctctgctgtttcaataggaagcagaaatgaagcctcacacagatct
gtatggtggatcagatctgactgttttctgtctgaatcttccctgatggactgtgtatca
tcacgttcatcttcctccatagtggagctcacctgctcagactctgtcaggctggtgaat
gggactagtctgtgttcaggcagactggaggtgaagtctgagcagtcgtggtcctcagtg
tgtgaacctgactttgaccagcaggatgcagaggtggtttgtagggagcttggctgtggg
actcctttagtcctccagggggcgctctatggagaagtggaggctccaatgtggaccaaa
gagttccagtgtggaggcaatgagtctgctctgctggactgtagaagatcagactcagct
agaagaacctgctcacctggtaaagctgttggactcacctgctcaccagagcctgtcagg
ttggtgggaggagccagtcgctgtgcaggtacactggagatgaaacatggagagtggaga
ccagtgagttactctgtctggaccctgaaggaagccgctataatatgcagacatctggac
tgtggctctgctctttcaataagcagcagaaatgaatactcatacagatctctatggagc
atcagttctgactgtgttcagtctggatctgcactgagggactgtgcatcatcatattcc
tcttacttcatcatggaaatcacctgctcagactctgtcaggctggtgaatgggactagt
ctgtgttcaggcagactggaggtgaagtctgagcagtcgtggtcctcagtgtgtgaagct
gactttgaccagcaggatgcagaggtggtctgtaggcagattgactgtggggctccttca
gtcctccagggggcgctctatggagaagtggaggctccaatgtggaccaaagagttccag
tgtggaggcaatgagtctgctctcctggactgtagaagatcaaactcagctagaagaacc
tgctcacctggtaaagctgttggactcacctgctcagagcctgtcaggttggtgggagga
gccagtcgctgtgcaggtacactggaggtgaaatatggagagtggagaccagtgtggtac
tatgactggatcccgaaggatgcagatgtaatatgtagatatttggactgtggctctgct
gtttcaacaagaagcagagatgaagcctcaagcagatctacatggtggttcagatctgac
tggcttcattctgcttctgatgtgagggactgtgtgttctcatattcctcttcctccatc
ttggagctcacttgctcagactctgtcaggctggtgaatgggactagtctgtgttcaggc
agactggaggtgaagtctgagcagacgtggtcctcagtgtgtgaagctgactttgaccag
caggatgcagaggtggtctgtagggatcttggctgtggggctccttcagtcctccagggg
gcgctctatggagaagtggaggctccaatgtggaccaaagagttccagtgtggaggcaat
gagtctgctctcctggactgtagaagatcaaactcaactagaagaacctgctcacctggt
aaagctgttggactcacctgctcagatcctgtcaggttggtgggaggagccagtcgctgt
gcaggtacactggagctgaaatatggagagtggagaccagtcggtggaaaattctatgac
tggaccctgaagaaagcagatgcaatatgtagatctctggattgtggctctgctgtttct
acaggaatcagaaatgtacactcataccgtatgtctgtatggtggatcagctctgagtgt
cttcaacctggatctgcactgatggactgtgcatcatcatcaggttcttcttcctccatc
ttggagatcacctgttcaggatgcagaggtggtctgtag
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