Scomber scombrus (Atlantic mackerel): 134003178
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Entry
134003178 CDS
T10651
Name
(RefSeq) LOW QUALITY PROTEIN: scavenger receptor cysteine-rich type 1 protein M130-like
KO
K06545
CD163 antigen
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
CD molecules [BR:
ssco04090
]
Proteins
134003178
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Gene cluster
GFIT
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NCBI-GeneID:
134003178
NCBI-ProteinID:
XP_062298289
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Position
21:complement(25085829..25105701)
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AA seq
1120 aa
AA seq
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MDHLLMVLVLLCSSGLQAEDDHQSEFRLVGGASRCAGTLELKHGEWRSVSPFLWTRKEAD
IICRYLDCGSAVSTRSRNVDSDRSVWRIISYCLHFGSALRDCVSSSYLSSSIVEITCSDS
VRLVNGTSRCSGRLEVKSEQSWSSVCEADFDQQDAEVVCRELGCEAPSVLQGALYGEVEA
PMWTKEFQCGGHESALLDCRRSDSARRTCSPGKAVGLTCSEPVRLVGGASRCAGTLHLKY
GEWRPVSSSRWTLKEAYIICRSLDCGSAVSTRSRNEYSYRSVWRISSDCVQSGSALRDCV
SSDSSDFIMEITCSDSVRLVNGTSLCSGRLEVKSEQSWSSVCEADFDQQDAEVVCRDLGC
GAPSVLQGALYGEVETPMWTKEFQCGGNESALLDCRRSDSARRTCSPGKAVGLTCSEPVR
LVGGASRCAGTLEMKHGEWRPVMSDSDWTLKKADVICRYLDCGSAVSIRSRNEASDRSVW
WISSNLLHSGSELRDCVSSHSSSSILELTCSDSVRLVNGTSLCSGRLEVKSEQPWSSVCE
ADFDQQDAEVVCRDLGCGAPSVLQGALYGEVEAPMWTKEFQCGGNESALLDCRRSDSARR
TCSPGKAVGLTCSEPVRLVGGASRCAGTLEMKHGEWRPVEHYYWTMKEADVICRYMDCGS
AVSTRSRSASYRSVWSISSDCVQSGSALRDCVSSDSSSSILEITCSGKSIRRQHPKGKSF
IGMNVAVKYSQNXXWSSLSPDSVRLVNGTSLCSGRLEVKSEQSWSSVCEADFDQQDAEVV
CRELGCGAPSVLQGALYGEVEAPMWTKEFQCGGHESALLDCRRSDSARRTCSPGKAVGLT
CSDPVRLVGGASRCAGTLEVKHGEWRPVMSDSDWTLKKADVICRYLDCGSAVSTGSRNEA
SDRSVWWIISDCLQSGSDLRDCVSSGSSSSIVELTCSDLLLQPIISVYSTMDGVSGAQQQ
GFQVLQTYNYTQPAVNHSADFLFPAADPAHQGNYSCVYGVYVFSHNFSSESRLLSLTVTD
PDEKPYRTGSIIPPVVLLVALLLVVIIIYFILKASRGQKSDSQEDTEMDYYDLGVSRAEG
EPAEEEEAQGALTAVGHHQHQRSKTGSSETFIEPTRRRAE
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atggatcacctgctgatggtgttggtgttgctgtgcagctcaggactccaggctgaagat
gatcaccaatcagagttcaggttggtgggaggagccagtcgctgtgcaggtacactggag
ctgaaacatggagagtggagatcagtgagtccctttctctggacccggaaggaagcagat
ataatatgcagatatttggactgtggctctgctgtttcaacaagaagcagaaatgtagac
tcagacagatctgtatggaggatcatatcttactgtcttcattttggatctgcactgagg
gactgtgtatcatcatcatatttatcgtcctccatcgtggagatcacctgctcagactct
gtcaggctggtgaatgggactagtcggtgttcaggcagactggaggtgaagtctgagcag
tcgtggtcctcagtgtgtgaagctgactttgaccagcaggatgcagaggtggtctgtagg
gagcttggctgtgaggctccttcagtcctccagggggcgctctatggagaagtggaggct
ccaatgtggaccaaagagttccagtgtggaggccatgagtctgctctcctggactgtaga
agatcagactcagctagaagaacctgctcacctggtaaagctgttggactcacctgctca
gagcctgtcaggttggtgggaggagccagtcgctgtgcaggtacactgcacctgaaatat
ggggagtggagaccagttagttcctctcgctggaccctgaaggaagcatatataatatgt
agatccctggattgtggctctgctgtttcaacaagaagcagaaatgaatactcatacaga
tcggtatggaggatcagttctgactgtgttcagtctggatctgcactgagggactgtgta
tcatcagattcctctgacttcatcatggaaatcacctgctcagactctgtcaggctggtg
aatgggactagtctgtgttcaggcagactggaggtgaagtctgagcagtcgtggtcctca
gtgtgtgaagctgactttgaccagcaggatgcagaggtggtctgtagggatcttggctgt
ggggctccttcagtcctccagggggcgctctatggagaagtggagactccaatgtggacc
aaagagttccagtgtggaggcaatgagtctgctctcctggactgtagaagatcagactca
gctagaagaacctgctcacctggtaaagctgttggactcacctgctcagagcctgtcagg
ttggtgggaggagccagtcgctgtgcaggtacactggagatgaaacatggagagtggaga
ccagtgatgagtgactctgactggaccctgaagaaagcagatgtaatatgtagatatttg
gactgtggctctgctgtttcaataagaagcagaaatgaagcctcagacagatctgtatgg
tggatcagctctaacttacttcattctggatctgagctgagggactgtgtatcatcacat
tcctcttcctccatcttggagctcacctgctcagactctgtcaggctggtgaatgggact
agtctgtgttcaggcagactggaggtgaagtctgagcagccgtggtcctcagtgtgtgaa
gctgactttgaccagcaggatgcagaggtggtctgtagggatcttggctgtggggctcct
tcagtcctccagggggcgctctatggagaagtggaggctccaatgtggaccaaagagttc
cagtgtggaggcaatgagtctgctctcctggactgtagaagatcagactcagctagaaga
acctgctcacctggtaaagctgttggactcacctgctcagagcctgtcaggttggtggga
ggagccagtcgctgtgcaggtacactggagatgaaacatggagagtggagaccagtagag
cattattactggaccatgaaggaagcagacgtaatatgtagatatatggactgtggctct
gctgtttcaacaagaagcagaagcgcctcatacagatctgtatggagcatcagttctgac
tgtgttcagtctggatctgcactgagggactgtgtatcatcagattcctcttcctccatc
ttggagatcacctgctcaggtaagtccatcagacgacagcatcctaaaggaaaaagcttt
attggtatgaatgttgcagttaaatattcccaaaactaatgatggtcctctctttctcca
gactctgtcaggctggtgaatgggactagtctgtgttcaggcagactggaggtgaagtct
gagcagtcgtggtcctcagtgtgtgaagctgactttgaccagcaggatgcagaggtggtc
tgtagggagctaggctgtggggctccttcagtcctccagggggcgctctatggagaagtg
gaggctccaatgtggaccaaagagttccagtgtggaggccatgagtctgctctcctggac
tgtagaagatcagactcagctagaagaacctgctcacctggtaaagctgttggactcacc
tgctcagatcctgtcaggttggtgggaggagccagtcgctgtgcaggtacactggaggtg
aaacatggagagtggagaccagtgatgagtgactctgactggaccctgaagaaagcagat
gtaatatgtagatatttggactgtggctctgctgtttcaacaggaagcagaaatgaagcc
tcagacagatctgtatggtggatcatatctgactgtcttcagtctggatctgacctgagg
gactgtgtatcctcaggttcctcttcctccattgtggagctcacctgctcagacctgctg
cttcagccaatcatctctgtgtattctaccatggacggggtctccggggcccagcagcag
gggtttcaggttctccaaacatacaactacacccagccagctgtcaatcactctgctgac
ttcctgtttcctgctgcagaccccgcccaccaaggaaactacagctgtgtttatggcgtc
tatgttttttctcataacttctcctctgagagccgtctgctctctctcactgtcacagat
ccagatgagaaaccttacagaacaggttctatcatcccaccagtcgtcctgctggtggct
ctgctgttggtcgtcattatcatctatttcatcctgaaggccagcagggggcagaagtca
gactcacaggaggacactgagatggattattatgacctcggtgtttccagagctgaagga
gagccggctgaagaggaagaagctcagggagccctgacagcagttggtcatcaccagcac
caacgctccaaaacaggaagtagtgagacctttattgagcccactagaagaagagcagag
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