Scomber scombrus (Atlantic mackerel): 134003180
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Entry
134003180 CDS
T10651
Name
(RefSeq) LOW QUALITY PROTEIN: scavenger receptor cysteine-rich type 1 protein M130-like
KO
K06545
CD163 antigen
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
CD molecules [BR:
ssco04090
]
Proteins
134003180
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134003180
NCBI-ProteinID:
XP_062298290
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Position
21:complement(25110055..25129675)
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AA seq
1035 aa
AA seq
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MDHLLMVLVLLCSSGLQAEDDHQSEFRLVGGASRCAGTLELKHGEWRSVSPFLWTRKEAD
IICRYLDCGSAVSTRSRNVDSDRSVWRIISYCLHFGSALRDCVSSSYLSSSIVEITCSDS
VRLVNGTSRCSGRLEVKSEQSWSSVCEADFDQQDAEVVCRELGCEAPSVLQGALYGEVEA
PMWTKEFQCGGHESAILDCRRSDSARRTCSPGKAVGLTCSEPVRLVGGASRCAGTLHLKY
GEWRPVSSSRWTLKEAYIICRSLDCGSAVSTRSRNEYSYRSVWRISSDCVQSGSALRDCV
SSDSSDFIMEITCSDSVRLVNGTSLCSGRLEVKSEQSWSSVCEADFDQQDAEVVCRDLGC
GAPLVLQGALYGEVEAPMWTKEFQCGGNESALLDCRRSDSARRTCSPGKAVGLTCSEPVR
LVGGASRCAGTLEVKHGEWRPVMSDSDWTLKKADVICRYLDCGSAVSIRSRNEASDRSVW
WISSNLLHSGSELRDCVSSHSSSSILELTCSDSVRLVNGTSLCSGRLEVKSEQSWSSVCE
ADFDQQDAEVVCRELGCGAPSVLQGALYGEVEAPMWTKEFQCGGNESALLDCRRSDSARR
TCSPGKAVGLTCSEPVRLVGGASRCAGTLEMKHGEWRPVEHYDWTMKEADVICRYMDCGS
AVSTRSRSASYRSVWSISSDCVQSGSALRDCVSSDSSSSILEITCSGKSIRRQHPKGKSF
IGMNVAVKYSQNXXWSSLSPDSARLVNGTSLCSGRLEVKSEQSWSSVCEADFDQQDAEVV
CRELGCGAPSVLQGALYGEVEAPMWTKEFQCGGHESALLDCRRSDSTRRTCSPGKAVGLT
CSDPVRLVGGASRCAGTLEVKHGEWRPVMSDSDWTLKKADVICRYLDCGSAVSIRSRNEA
SDRSVWWIISDCLQSGSDLRDCVSSGSSSSIVELTCSDLLLQPIISVYSTMDGVSGAQQQ
GFQVLQTYNYTQPAVNHSADFLFPAADPAHQGNYSCVYGVYVFSHNFSSESRLLSLTVTG
KLKQTVKLSPTETSH
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggatcacctgctgatggtgttggtgttgctgtgcagctcaggactccaggctgaagat
gatcaccaatcagagttcaggttggtgggaggagccagtcgctgtgcaggtacactggag
ctgaaacatggagagtggagatcagtgagtccctttctctggacccggaaggaagcagat
ataatatgcagatatttggactgtggctctgctgtttcaacaagaagcagaaatgtagac
tcagacagatctgtatggaggatcatatcttactgtcttcattttggatctgcactgagg
gactgtgtatcatcatcatatttatcgtcctccatcgtggagatcacctgctcagactct
gtcaggctggtgaatgggactagtcggtgttcaggcagactggaggtgaagtctgagcag
tcgtggtcctcagtgtgtgaagctgactttgaccagcaggatgcagaggtggtctgtagg
gagcttggctgtgaggctccttcagtcctccagggggcgctctatggagaagtggaggct
ccaatgtggaccaaagagttccagtgtggaggccatgagtctgctatcctggactgtaga
agatcagactcagctagaagaacctgctcacctggtaaagctgttggactcacctgctca
gagcctgtcaggttggtgggaggagccagtcgctgtgcaggtacactgcacctgaaatat
ggggagtggagaccagttagttcctctcgctggaccctgaaggaagcatatataatatgt
agatccctggattgtggctctgctgtttcaacaagaagcagaaatgaatactcatacaga
tcggtatggaggatcagttctgactgtgttcagtctggatctgcactgagggactgtgta
tcatcagattcctctgacttcatcatggaaatcacctgctcagactctgtcaggctggtg
aatgggactagtctgtgttcaggcagactggaggtgaagtctgagcagtcgtggtcctca
gtgtgtgaagctgactttgaccagcaggatgcagaggtggtctgtagggatcttggctgt
ggggctcctttagtcctccagggggcgctctatggagaagtggaggctccaatgtggacc
aaagagttccagtgtggaggcaatgagtctgctctcctggactgtagaagatcagactca
gctagaagaacctgctcacctggtaaagctgttggactcacctgctcagagcctgtcagg
ttggtgggaggagccagtcgctgtgcaggtacactggaggtgaaacatggagagtggaga
ccagtgatgagtgactctgactggaccctgaagaaagcagatgtaatatgtagatatttg
gactgtggctctgctgtttcaataagaagcagaaatgaagcctcagacagatctgtatgg
tggatcagctctaacttacttcattctggatctgagctgagggactgtgtatcatcacat
tcctcttcctccatcttggagctcacctgctcagactctgtcaggctggtgaatgggact
agtctgtgttcaggcagactggaggtgaagtctgagcagtcgtggtcctcagtgtgtgaa
gctgactttgaccagcaggatgcagaggtggtctgtagggagcttggctgtggggctcct
tcagtcctccagggggcgctctatggagaagtggaggctccaatgtggaccaaagagttc
cagtgtggaggcaatgagtctgctctcctggactgtagaagatcagactcagctagaaga
acctgctcacctggtaaagctgttggactcacctgctcagagcctgtcaggttggtggga
ggagccagtcgctgtgcaggtacactggagatgaaacatggagagtggagaccagtagag
cattatgactggaccatgaaggaagcagacgtaatatgtagatatatggactgtggctct
gctgtttcaacaagaagcagaagcgcctcatacagatctgtatggagcatcagttctgac
tgtgttcagtctggatctgcactgagggactgtgtatcatcagattcctcttcctccatc
ttggagatcacctgctcaggtaagtccatcagacgacagcatcctaaaggaaaaagcttt
attggtatgaatgttgcagttaaatattcccaaaactaatgatggtcctctctctctcca
gactctgccaggctggtgaatgggactagtctgtgttcaggcagactggaggtgaagtct
gagcagtcgtggtcctcagtgtgtgaagctgactttgaccagcaggatgcagaggtggtc
tgtagggagctaggctgtggggctccttcagtcctccagggggcgctctatggagaagtg
gaggctccaatgtggaccaaagagttccagtgtggaggccatgagtctgctctcctggac
tgtagaagatcagactcaactagaagaacctgctcacctggtaaagctgttggactcacc
tgctcagatcctgtcaggttggtgggaggagccagtcgctgtgcaggtacactggaggtg
aaacatggagagtggagaccagtgatgagtgactctgactggaccctgaagaaagcagat
gtaatatgtagatatttggactgtggctctgctgtttcaataagaagcagaaatgaagcc
tcagacagatctgtatggtggatcatatctgactgtcttcagtctggatctgacctgagg
gactgtgtatcctcaggttcctcttcctccattgtggagctcacctgctcagacctgctg
cttcagccaatcatctctgtgtattctaccatggacggggtctccggggcccagcagcag
gggtttcaggttctccaaacatacaactacacccagccagctgtcaatcactctgctgac
ttcctgtttcctgctgcagaccccgcccaccaaggaaactacagctgtgtttatggcgtc
tatgttttttctcataacttctcctctgagagccgtctgctctctctcactgtcacaggt
aagctgaagcagactgtgaagctcagtccaactgagacgtcacactga
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