Scomber scombrus (Atlantic mackerel): 134003182
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Entry
134003182 CDS
T10651
Name
(RefSeq) LOW QUALITY PROTEIN: scavenger receptor cysteine-rich type 1 protein M130-like
KO
K06545
CD163 antigen
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
CD molecules [BR:
ssco04090
]
Proteins
134003182
BRITE hierarchy
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134003182
NCBI-ProteinID:
XP_062298291
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Position
21:complement(25155099..25174731)
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AA seq
1109 aa
AA seq
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MDHLLMVLVLLCSSGLQAEDDHQSEFRLVGGASRCAGTLELKHGEWRSVSPFLWTRKEAD
IICRYLDCGSAVSTRSRNVDSDRSVWRIISYCLHFGSALRDCVSSSYLSSSIVEITCSDS
VRLVNGTSRCSGRLEVKSEQSWSSVCEADFDQQDAEVVCRELGCEAPSVLQGALYGEVEA
PMWTKEFQCGGHESALLHCRRSDSARRTCSPGKAVGLTCSEPVRLVGGASRCAGTLHLKY
GEWRPVSSSRWTLKEAYIICRSLDCGSAVSTRSRNEYSYRSVWRISSDCVQSGSALRDCV
SSDSSDFIMEITCSDSVRLVNGTSLCSGRLEVKSEQSWSSVCEADFDQQDAEVVCRDLGC
GAPSVLQGALYGEVETPMWTKEFQCGGNESALLDCRRSDSARRTCSPGKAVGLTCSEPVR
LVGGASRCAGTLEVKHGEWRPVMSDSDWTLKKADVICRYLDCGSAVSIRSRNEASDRSVW
WISSNLLHSGSELRDCVSSHSSSSILELTCSDSVRLVNGTSLCSGRLEVKSEQSWSSVCE
ADFDQQDAEVVCRDLGCGAPSVLQGALYGEVEAPMWTKEFQCGGNESALLDCRRSDSARR
TCSPGKAVGLTCSEPVRLVGGASRCAGTLEMKHGEWRPVEHYDWTMKEADVICRYMDCGS
AVSTRSRSASYRSVWSISSDCVQSGSALRDCVSSDSSSSILEITCSGKSIRRQHPKGKSF
IGMNVAVKYSQNXXWSSLSPDSARLVNGTSLCSGRLEVKSEQSWSSVCEADFDQQDAEVV
CRELGCGAPSVLQGALYGEVEAPMWTKEFQCGGNESALLDCRRSDSARRTCSPGKAVGLT
CSDPVRLVGGASRCAGTLEVKHGEWRPVMSDSDWTLKKADVICRYLDCGSAVSIRSRNEA
SDRSVWWIISDCLQSGSDLRDCVSSGSSSSIVELTCSDLLLQPIISVSPTLDGVSGAQQQ
GFQVLQTHNYTQPAVNHSADFLFPAADPAHQGNYSCVYGVYVFSHNFSSESRLLSLTVTD
PDEKSSDKTPYRTGSIIPPVVLLVALLLVVIIIFFILKASRGQKSDPQEDTEMDYYDLCV
SRAEGGRGRSSGSPDSSWSSPAPTLQNRK
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atggatcacctgctgatggtgttggtgttgctgtgcagctcaggactccaggctgaagat
gatcaccaatcagagttcaggttggtgggaggagccagtcgctgtgcaggtacactggag
ctgaaacatggagagtggagatcagtgagtccctttctctggacccggaaggaagcagat
ataatatgcagatatttggactgtggctctgctgtttcaacaagaagcagaaatgtagac
tcagacagatctgtatggaggatcatatcttactgtcttcattttggatctgcactgagg
gactgtgtatcatcatcatatttatcgtcctccatcgtggagatcacctgctcagactct
gtcaggctggtgaatgggactagtcggtgttcaggcagactggaggtgaagtctgagcag
tcgtggtcctcagtgtgtgaagctgactttgaccagcaggatgcagaggtggtctgtagg
gagcttggctgtgaggctccttcagtcctccagggggcgctctatggagaagtggaggct
ccaatgtggaccaaagagttccagtgtggaggccatgagtctgctctcctgcactgtaga
agatcagactcagctagaagaacctgctcacctggtaaagctgttggactcacctgctca
gagcctgtcaggttggtgggaggagccagtcgctgtgcaggtacactgcacctgaaatat
ggggagtggagaccagttagttcctctcgctggaccctgaaggaagcatatataatatgt
agatccctggattgtggctctgctgtttcaacaagaagcagaaatgaatactcatacaga
tcggtatggaggatcagttctgactgtgttcagtctggatctgcactgagggactgtgta
tcatcagattcctctgacttcatcatggaaatcacctgctcagactctgtcaggctggtg
aatgggactagtctgtgttcaggcagactggaggtgaagtctgagcagtcgtggtcctca
gtgtgtgaagctgactttgaccagcaggatgcagaggtggtctgtagggatcttggctgt
ggggctccttcagtcctccagggggcgctctatggagaagtggagactccaatgtggacc
aaagagttccagtgcggaggcaatgagtctgctctcctggactgtagaagatcagactca
gctagaagaacctgctcacctggtaaagctgttggactcacctgctcagagcctgtcagg
ttggtgggaggagccagtcgctgtgcaggtacactggaggtgaaacatggagagtggaga
ccagtgatgagtgactctgactggaccctgaagaaagcagatgtaatatgtagatatttg
gactgtggctctgctgtttcaataagaagcagaaatgaagcctcagacagatctgtatgg
tggatcagctctaacttacttcattctggatctgagctgagggactgtgtatcatcacat
tcctcttcctccatcttggagctcacctgctcagactctgtcaggctggtgaatgggact
agtctgtgttcaggcagactggaggtgaagtctgagcagtcttggtcctcagtgtgtgaa
gctgactttgaccagcaggatgcagaggtggtctgtagggatcttggctgtggggctcct
tcagtcctccagggggcgctctatggagaagtggaggctccaatgtggaccaaagagttc
cagtgtggaggcaatgagtctgctctcctggactgtagaagatcagactcagctagaaga
acctgctcacctggtaaagctgttggactcacctgctcagagcctgtcaggttggtggga
ggagccagtcgctgtgcaggtacactggagatgaaacatggagagtggagaccagtagag
cattatgactggaccatgaaggaagcagacgtaatatgtagatatatggactgtggctct
gctgtttcaacaagaagcagaagcgcctcatacagatctgtatggagcatcagttctgac
tgtgttcagtctggatctgcactgagggactgtgtatcatcagattcctcttcctccatc
ttggagatcacctgctcaggtaagtccatcagacgacagcatcctaaaggaaaaagcttt
attggtatgaatgttgcagttaaatattcccaaaactaatgatggtcctctctctctcca
gactctgccaggctggtgaatgggactagtctgtgttcaggcagactggaggtgaagtct
gagcagtcgtggtcctcagtgtgtgaagctgactttgaccagcaggatgcagaggtggtc
tgtagggagcttggctgtggggctccttcagtcctccagggggcgctctatggagaagtg
gaggctccaatgtggaccaaagagttccagtgtggaggcaatgagtctgctctcctggac
tgtagaagatcagactcagctagaagaacctgctcacctggtaaagctgttggactcacc
tgctcagatcctgtcaggttggtgggaggagccagtcgctgtgcaggtacactggaggtg
aaacatggagagtggagaccagtgatgagtgactctgactggaccctgaagaaagcagat
gtaatatgtagatatttggactgtggctctgctgtttcaataagaagcagaaatgaagcc
tcagacagatctgtatggtggatcatatctgactgtcttcagtctggatctgacctgagg
gactgtgtatcctcaggttcctcttcctccattgtggagctcacctgctcagacctgctg
cttcagccaatcatctctgtgtctcctaccctggacggggtctccggggcccagcagcag
gggtttcaggttctccaaacacacaactacacccagccagctgtcaatcactctgctgac
ttcctgtttcctgctgcagaccccgcccaccaaggaaactacagctgtgtttatggcgtc
tatgttttttctcataacttctcctctgagagccgtctgctctctctcactgtcacagat
ccagatgagaaatcctcagataagacaccttacagaacaggttctatcatcccaccagtt
gtcctgctggtggctctgctgttggtcgtcattatcatctttttcatcctgaaggccagc
agggggcagaagtcagacccacaggaggacactgagatggattattatgacctctgtgtt
tccagagctgaaggaggaagaggaagaagctcagggagccctgacagcagttggtcatca
ccagcaccaacgctccaaaacaggaagtag
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