Scomber scombrus (Atlantic mackerel): 134003301
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Entry
134003301 CDS
T10651
Symbol
trim16
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134003301 (trim16)
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134003301 (trim16)
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134003301
NCBI-ProteinID:
XP_062298434
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Position
21:21262639..21273508
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AA seq
633 aa
AA seq
DB search
MAATAAEEAAPTSKQQQKLCSVCSGVLSGDQPAACGHSVCVSCLGDTSKGCTESLKSLDK
PEPAKQNGTEAEAPAINSKEEQNQDSKTTEEIKIQEDLKESEDPKKPEEDKKEAEPQTNG
AEEEVKEEPLGPDDVVCDSCIESPCRALKSCLTCLVSYCEAHLRPHLENPKFQNHRLVEP
LRDIERRTCESHKWPLELFCCADDCCICQDCVTEDHKGHNTMPVVEARRRIERELKDKQT
EMVKTVTSAENAINKLQLNTVSIEHSVTEVRAVIESQFEELQAVVERAKREVAEILAGEE
KQALKQAEGIRVHLEQRCTELKKTQAQVEKLSKNKNDVDFLQEYSQWKKEATDTSLPGVY
IGLMDRLNSFSHVIVKSTEELCAMLVSSYIDKVKETCKNDKMGIKTTVQAIVAAKQNITL
PNPETRTDFLKYAAQVTFDGDTAHKFLRLTEENRKVTNTTPWQHPYPDVPERFENWRQLL
ATESFYMGRHYFEVDISGEGTHIGVTYKSIDRKGSESNSCITGNNFSWCIQWNGRTFSAW
HSDVETPLNVEKFTRIGVYVNYTQGFLAFYGVSDTMTLIHEYKAEFLEPLYPAFWLSKKE
NIVALVAPGEPLPLKSPSPPTSPANGIVSKTAA
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaacagcagctgaagaagcagctcccacctccaagcagcagcagaaactatgc
agcgtctgctcaggtgtcctgagtggagaccagccggcagcctgtggacactctgtttgt
gtctcctgcctcggtgacacaagcaaaggatgcaccgagtctctgaagagcctcgacaag
cctgagcctgccaaacagaatggaacagaggctgaggctcctgcaattaacagcaaagag
gagcaaaatcaagattcaaagacaaccgaggagatcaaaatacaagaagatctgaaggag
tctgaggaccccaagaagcctgaagaggacaagaaagaggcagaaccgcagacaaatgga
gcagaagaggaggtgaaggaggaacctttgggccctgacgatgtggtgtgtgattcgtgt
attgagagcccctgcagagctctcaagtcctgcctcacctgcctggtgtcctactgcgag
gcccacctccggcctcacctggagaacccaaagtttcagaaccaccggctggtggagccg
ctcagggacatcgagaggcggacatgtgagagccacaagtggcccctggagcttttctgc
tgtgctgacgactgctgcatctgtcaagactgtgtgacggaggaccacaagggccacaac
accatgcctgtggtggaggctcgcagacggatagagagggaactgaaggacaagcagact
gagatggtgaagacagtgacgtcagcggagaacgccatcaacaaactacaactcaacaca
gtctccattgagcattcggtgaccgaggtacgagcagtgattgaaagccaattcgaggag
ctgcaggcggtggtggagagggccaagcgggaggtggcggagatcctggcgggtgaggag
aagcaggcgctgaaacaggctgagggtatccgggttcatctggagcagaggtgcacagag
ctgaagaagacacaagcgcaggtggagaagctctccaaaaacaaaaatgatgtggacttc
ctgcaggagtattcacagtggaagaaagaagccactgatacctcgctgcctggggtctac
atcggacttatggaccgtctgaattccttcagccatgtgatcgtcaagtccacggaggag
ctgtgtgccatgctcgtgtcttcatacatagacaaagttaaagagacgtgtaaaaatgat
aaaatggggataaagacaacagtccaggcgattgttgcggcaaaacagaacataacgtta
ccaaatccagagactcgtacagacttcctcaagtatgccgcccaggtgactttcgatggt
gacacagctcacaagttcctgcgcctgacagaggaaaacaggaaggtgactaataccaca
ccctggcaacatccttatcctgatgtacctgagcgctttgagaactggcgtcaattgctg
gcaacagagagcttctatatggggcggcactactttgaggtggatatcagcggcgagggc
acacacatcggcgtcacctacaagagcatcgaccgaaagggcagcgaaagcaacagctgc
atcacgggtaacaacttctcctggtgtattcagtggaacggacgcaccttctccgcttgg
cacagcgatgtggaaactcctctcaatgtggagaagttcacccgtatcggggtgtatgtg
aactacacgcaaggcttcttggctttttacggagtgagtgataccatgacgctcatccac
gagtacaaggcagagttcctggagcctctttacccagctttctggttgtctaagaaggag
aatattgttgccttggtggcacctggagagccattaccgctcaaaagcccctctcctccc
acctcacctgcaaatggaattgtttcaaaaacagcagcatag
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