KEGG   Scomber scombrus (Atlantic mackerel): 134003319
Entry
134003319         CDS       T10651                                 
Symbol
chad
Name
(RefSeq) chondroadherin
  KO
K06248  chondroadherin
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco04510  Focal adhesion
ssco04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    134003319 (chad)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    134003319 (chad)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:ssco00535]
    134003319 (chad)
Proteoglycans [BR:ssco00535]
 Extracellular matrix (ECM) proteoglycans
  Small leucine-rich proteoglycan (SLRP) family
   class IV
    134003319 (chad)
SSDB
Motif
Pfam: LRR_8 LRR_1 LRR_4 LRR_5 LRRNT LRR_9 LRR_14 LRR_LRWD1 LRRCT
Other DBs
NCBI-GeneID: 134003319
NCBI-ProteinID: XP_062298464
LinkDB
Position
21:20407553..20413747
AA seq 363 aa
MRCVSWLLLGTCLLVLGPAVQGAPGQCPSLCHCHGDLQHVICDNVGLKKIPRVSEATRLL
NLQRNNLGNIPTGAFSESKGLISLHMQNCQLREIGSQAFKGLKKLIYLYLSNNDISSIKP
GAFDDLTELTYLYLDGNQISDLAKGIFSPMINLFILQLDDNKLRELRSGTFSGAKDLRWL
HMSGNELSTMQPGCLDDVENLAILHLERNKLSTYPSVAMSKLRVVEELTLGRNPMRTIPD
NAFQSFGRYMEKLHLDNMGLERFSEGAFVGVTAVKSLNLDNNKLKFLPRSLEFGTITNLT
LSNNPWSCACQLAPLRRWMDSSRNRPDAVCASPPPQKGKQVRDSTAFSGCRVKQKRAKKG
TRH
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgcggtgcgtaagctggttgttgctggggacctgcctcttggttctgggccccgcagtg
cagggcgccccgggccagtgccccagcttgtgccactgccacggtgatcttcagcacgtc
atctgtgacaacgtcgggctcaagaagatccctcgggtgtcagaggccacccgtctgctg
aacttgcagaggaacaacttaggcaacatacccacgggggccttcagcgaaagcaaggga
ctcatctctctgcacatgcagaattgccaactccgagagattggatcccaggccttcaag
gggctgaagaagctcatctacctctacctatccaacaacgacatcagcagcatcaagccg
ggcgccttcgatgacctgaccgagctcacttacctctatctagatgggaaccagataagt
gacctggctaagggcatcttctccccaatgatcaacctctttattctgcagctcgatgac
aacaagctccgggagttgaggtcgggtacgttctcaggtgccaaagatttacgctggctg
cacatgagcgggaacgagctgtcgaccatgcagccgggctgtctggacgacgtggagaac
ctcgctatacttcacctggaaaggaacaagctgtccacctatcccagtgtggcaatgagc
aaactgcgagtggtggaggaactcacgctggggaggaaccccatgaggaccattccagac
aacgccttccagagctttgggcgctacatggagaaactacacctggacaacatgggtctg
gagaggttctctgaaggtgcgtttgttggtgtgacagcagtcaagtcgctaaacctggac
aacaacaagctaaagtttcttcccagaagcctcgagtttggtaccatcacaaacctcacc
ctctccaacaacccatggagctgcgcatgtcagctagctccgctacgcaggtggatggac
tcaagccgcaatcgtccagatgcagtgtgtgcttctccacctccgcagaaaggcaagcaa
gtcagagacagcaccgcctttagtggctgcagagtcaagcagaagagagccaaaaagggc
acacgtcattga

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