Scomber scombrus (Atlantic mackerel): 134003381
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Entry
134003381 CDS
T10651
Symbol
wdr24
Name
(RefSeq) GATOR2 complex protein WDR24
KO
K20408
SEA/GATOR complex protein SEA2/WDR24
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
134003381 (wdr24)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
134003381 (wdr24)
Membrane trafficking [BR:
ssco04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
134003381 (wdr24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
WD40
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
WD40_RFWD3
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_HPS5
ANAPC4_WD40
zf-RING_16
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
134003381
NCBI-ProteinID:
XP_062298547
LinkDB
All DBs
Position
21:complement(10779361..10786053)
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AA seq
789 aa
AA seq
DB search
MEKMSRVTTALGSSSISGRTMFCHLDAPANAISVCRDATQVVVAGRNIFKIYALEEEQFV
EKLNLRVGRKPSLNFSCADVMWHQMEENLLATAATNGAVVTWNLGKPSRNKQDQLFTEHK
RTVNKVCFHPTEVYMLLSGSQDGFMKCFDLRKKESVSTFSGQSESVRDVQFSMKDYFTFA
ASFENGNVQLWDIRRPDRYERMFTAHTGPVFCCDWHPDDRGWLATGGRDKMVKVWDMTTN
RAKEIYCVQTIASVARVKWRPERKFHLATCSMMVDHNIYVWDVRRPFIPFATFEEHKDVT
TGIVWRHQHDPHFLLSGSKDSTLYQHMFKDATRPVDKANPEGLCFGLFGDLAFAAKESLI
SSDVNRKPYPGGDRRYPIFFFKKPDPTEQFAHVSSALSVFETDLDSNRMDWFVKTAQLYL
LSGKPFAELCDHNAKVARELKRPQVSTTWTMLRIMFSDPANLTTPGPNHNLSKLGTLPLM
NSFSMKEMGSGMGTESRLERSKGESRQDNIHLEPGNSHISNNNEENEETEGSEGQAEYMF
GDAELDDDDLYSMEHENQTEEQEYTLPQEAFQLRHEIMDNPSAPEHLQQDKADSPHVSGN
EAEVTCLTPIESFSLISISQPLFTPHLPASFFCPIVREMLSYYAEQGDVQMAVSVLIVLG
DRIRKEIDDLTQEHWYMSYIDLLQRFELWNVSNEVIKLSTCSAITCLNQTSTTLHINCSN
CKRPMNNRGWICDRCHQCASVCAVCHHVVKGLFVWCQGCSHGGHLEHIMNWLKSSAHCPA
GCGHLCEYT
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggagaagatgtcacgggtcaccacagctcttggcagcagttccatcagtggccgaact
atgttctgccacctggacgctcctgccaatgccatcagcgtgtgccgtgacgccacgcag
gtggtggtggccggccgcaacatcttcaagatctatgcattggaagaggagcagtttgtg
gagaagctgaatctccgtgttggccgtaaaccctctctcaacttcagctgcgcagatgtc
atgtggcaccagatggaggagaacctgctggcaactgctgccaccaatggggcggtggtc
acctggaacctgggaaagccctctcgtaacaagcaggaccagctgtttactgagcacaaa
cgaaccgtcaacaaggtgtgcttccaccccacagaggtttacatgctgctaagtggctca
caggatggcttcatgaagtgctttgacctgcgcaagaaggagtctgtcagcactttttca
ggtcagtcagagagtgtaagggacgtccagttcagcatgaaggattatttcacatttgct
gcatcctttgagaatggcaatgtccagctgtgggacatcagacgaccagaccgctatgag
aggatgttcactgcccacactgggcctgtattctgctgcgactggcaccctgatgacaga
ggatggttggccacaggaggccgcgataagatggtgaaggtgtgggacatgacaacaaac
cgagccaaggagatctactgtgtccagaccatcgcctcagttgcacgagtaaagtggcgt
ccagagaggaagttccatttggccacttgctccatgatggtggatcacaacatctatgtg
tgggacgtccgaagacctttcattcccttcgcgacctttgaggaacacaaagatgtgacc
accggtattgtgtggcgccatcagcacgaccctcattttctgctttctggttctaaagac
agtacactctaccagcatatgtttaaggatgccactcgtcccgtggacaaggccaacccc
gagggtctgtgcttcggactgtttggcgacctggcctttgcagccaaggagagtctgatc
agcagtgacgttaacagaaagccttatcctggaggcgaccgccgctaccccatctttttc
ttcaagaagcccgatccgacagaacagtttgcccacgtgtccagtgctctcagtgtcttt
gagacagacttggacagtaaccgcatggactggttcgtcaagacagcacaactctacctc
ctcagcgggaagccgtttgctgagctgtgtgatcacaatgccaaggtggcacgtgagctc
aaaagacctcaggtttccacaacatggaccatgctgagaatcatgttctctgacccagca
aacctcacgacacccggtcctaaccacaacctcagtaaactgggtactctgcctctaatg
aacagtttcagtatgaaggaaatgggctcagggatgggcacagaaagcagactggagcgc
agtaaaggtgagagcaggcaggataacatccacctggagcccgggaactcacacatcagc
aataataatgaagaaaacgaggagacagagggtagtgagggacaggctgagtatatgttt
ggcgatgcagagttagatgacgacgacctctactcaatggaacacgaaaaccaaacagag
gagcaagagtacacgctgccccaggaggccttccagctgcgccacgagatcatggataac
ccatctgctcctgagcaccttcagcaggacaaggccgactccccgcatgtcagcggcaac
gaggcggaagtcacctgcctgacgcccatcgagtccttctcgctcatctccatttcccag
ccgctgttcacccctcatctccccgccagcttcttttgccccatcgtgcgggagatgctg
agctactacgccgagcagggagacgtacagatggccgtgtctgtgctcattgtcttgggg
gaccggatccgtaaagagattgatgacctcactcaggagcactggtacatgtcctacata
gacctgctgcagcgatttgagctgtggaacgtgtccaacgaggtcatcaagttgagtacg
tgcagcgccatcacctgcctgaatcagacgtctaccacactgcacatcaactgcagcaat
tgcaaacggccaatgaacaacaggggctggatttgtgacaggtgccaccagtgtgccagt
gtgtgtgcagtgtgccatcacgtggtaaagggactgtttgtgtggtgtcagggctgcagc
catggcggacatctggagcacataatgaactggctcaagagcagcgcccactgccctgcc
ggctgcggtcacctgtgtgaatacacctga
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