Scomber scombrus (Atlantic mackerel): 134003466
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Entry
134003466 CDS
T10651
Symbol
nrxn1a
Name
(RefSeq) neurexin 1a isoform X1
KO
K07377
neurexin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
134003466 (nrxn1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
134003466 (nrxn1a)
Membrane trafficking [BR:
ssco04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
134003466 (nrxn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Prokineticin
Motif
Other DBs
NCBI-GeneID:
134003466
NCBI-ProteinID:
XP_062298666
LinkDB
All DBs
Position
21:17652690..17712365
Genome browser
AA seq
1494 aa
AA seq
DB search
MAVCVWVAAPLLFLGMCLCSVGGQAQGEVLEFGGVSSQWGRFPVWNACCESVLSFSLRTH
SQEGLLLYLDDEGFCDFLELLLLHGHLRLRFSIFCAEPAELQSGVAVSDGHWHAVRVKRD
WRNTTLEVDGRQEGWAQVKSKRRDMTIFSHTFMGGVTQELHSSPLRLTSPSVREQPAFRG
WITAVSINGSLVTLDSSEGVTVTPGCGPDHQCQNGGVCSVVNDQAVCDCSDTGFQGNDCS
EGLAHLMIGDQAREEYVATFKGSEYFCYDLSPNPIQSSSDEITLSFKTLQRNGLMLHTGK
SADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAM
VNKLHCSVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLK
EVVYKNNDVRLELSRLAKQGDPKMKVSGVVSFKCESVATLDPVTFDTPESFVALSKWSAK
KAGSISFDFRTTEPNGLMLFSHGKPRQLQRKDPRTPPTIKVDFFAIEMLDGHLYLLLDMG
SGTTKTKAIDRKVNDGEWYHVDFQRDGRSGTISVNSVRTAYTAPGDSEILDLDDTLYLGG
LPEDRAGLIFPTEVWTALLNYGYVGCIRDLFVDGQSKDIRRLAEAQRAVGVKPSCSREPP
KQCLSNPCQHNGNCREGWNRYVCDCSGTGYLGRSCERDATILSYDGSKFMKVQLPVAMHT
EAEDVSLRFRSQRAYGVLMATTSRNSADTLRLELDGGRVRLTVNLGTHMNTHTNGVENCI
RINCTSSKGPETIFAGSGLNDNEWHTVRVVRRGKSLKLTVDDMQPVEGQMAGDHTQLEFH
NVETGIVTEKRYIPAVPSNFIGHLQGLALNGMPYIDLCKNGDIDYCELNAVIGYKTIVAD
PVTFRSRSSFVTLPTLQAYYSMHLFMQFKTTSPDGLILYNRGDGNDFIVVELVKGYLHYI
SDLGNGAHLIKGNSNSPLNDNHWHNVHISRDTNNLHTVKIDTKVTTQTTTGAKNLDLKGD
LYIGGVSKEMYRDLPKLVHSREGFQGCLATVDLNGRLPDLLADALATMGQVERGCEGPST
TCQEDSCSNQGVCLQQWEGFTCDCSMTSYAGPLCNDAGTTYIFGRDGGVVVYTWPPNERP
STRADRLALGFSTQQKHATLLRVDSASGLGDYLQLQIDKGNIRVVFNVGTDDINIEESTK
FVNDGKYHIIRFTRSGGNATLQLDDLPVIERYPSGNIDNERLAIARQRIPYRLGRVVDDW
LLDKGRQLTIFNSQTTVRVGGAERGAGMFQGQLSGLYYNGLRILNMAAEGHPHIRVEGSA
RLVGDMPSSSITPQSSAAAGGNRSDSAPSLSDITTTTASNRKQGATQQSADDLLVASAEC
PSDDEDIDPCDPSSARPPLTEVKVFPGPSEVVRESSSTTGMVVGIVAAAALCILILLYAM
YKYRNRDEGSYHVDESRNYISNSATQPNGSAKDKPLGIAKISKNKKNKDKEYYV
NT seq
4485 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgtgtgtttgggtggcggcccccctgctcttcctagggatgtgcctgtgcagc
gtggggggccaggcccaaggggaggtcctggagtttggaggcgtttccagtcagtggggg
cgttttccggtgtggaacgcctgctgcgagagtgtgctgagcttcagcctgcggactcac
agccaggagggcctgctgctctacctggatgacgagggcttctgcgacttcctggagctg
ctgctcctccacggccacctccgcctgcgcttctctatcttctgtgctgagccggccgag
ttgcagtcaggcgtggcggttagtgacgggcactggcacgcagtgcgtgtcaagcgggac
tggaggaacaccacgttggaggtggacgggcgacaagagggatgggcacaggtgaagagc
aagagaagagacatgacaatattcagccacacctttatgggcggggtgacgcaagagctc
cactcctcgcccctgcgactcacctccccttcggtgcgggaacaacccgccttccgtggc
tggatcacggcggtgagcatcaatggctcactggtgacactggacagctcagagggtgtc
acagttacacctggatgtgggccggaccaccagtgccaaaatggaggggtgtgcagcgtg
gtcaacgaccaagccgtctgcgactgctctgacacgggtttccaaggcaacgactgcagc
gaaggtctggcacacctgatgattggcgaccaagctcgcgaggagtatgttgccaccttc
aagggctctgagtatttctgctatgacctgtcgcccaaccccatccagtctagcagcgat
gaaatcacactttccttcaagacgctgcagcgcaacggcctgatgctgcacaccggcaag
tcagccgactacgtcaacctggcactgaagaacggtgctgtgtcgcttgtcatcaacctc
ggctccggggccttcgaggccttggtagagcccgtcaacggcaagttcaacgacaacgcc
tggcacgatgtcaaagtcacccgcaacctgagacagcactcaggcattggacacgctatg
gtaaacaaactccattgttcggtgaccatatctgtggacggcatcctgaccaccacgggc
tacacccaggaggactacaccatgttgggctctgacgacttcttctacgtgggtgggagc
cccagcaccgctgacctccctggttctccagtcagcaataacttcatgggctgtcttaaa
gaggtggtgtacaagaacaatgatgtacggttggagctgtctagactggctaaacaggga
gacccaaagatgaaggtaagtggggtggtgtcctttaagtgcgagagcgtagcaacgctg
gaccccgtgacctttgacaccccagaatctttcgtggcactgagcaagtggtcagcaaag
aaggcaggatccatctcattcgacttcaggaccacagagcccaacgggttgatgctcttc
agtcacggcaaacccagacagctgcaacgaaaggacccccgcacacctcctactatcaag
gtggatttctttgctatcgagatgctggatggacatctgtacttattgctggacatggga
tcaggaaccaccaaaaccaaggccatcgacaggaaggtcaatgatggagaatggtatcat
gtggacttccagagggacgggcgctcaggaaccatctcagtgaacagtgtgcgaactgcg
tacacggctccaggagacagtgagatcctggacctggatgacacgctttatctcggagga
ctacctgaggaccgtgctggactcatctttcctacagaggtgtggacagctctgttgaac
tacggttacgtgggctgcatcagagacctgtttgtggacgggcagagtaaagacatccgg
cggcttgcggaggctcagagggcggtgggcgtcaagccttcgtgctccagagagccaccc
aaacaatgcctctccaacccctgccagcacaatggcaactgcagggagggatggaatcgc
tacgtctgcgactgctctgggacgggttacctggggcgctcttgtgaaagagatgcaact
atcctgtcgtacgacggcagtaagtttatgaaggtgcagttgcctgtggcgatgcacacc
gaggcggaggacgtctcgctacggtttcgctcccagcgggcctatggcgttctcatggca
accacatcccgtaactccgcagacacccttcgtctggagctggatgggggccgtgtccga
ctcactgtcaacctaggtacacacatgaacacacacacaaatggcgtggagaactgtatc
aggataaactgtacatccagtaaaggcccagagaccatctttgcggggtcgggcctcaat
gataatgagtggcacacagtgagagtagtccggcgtggcaagagcctcaagctcaccgtg
gacgacatgcagccagttgaaggtcaaatggcgggcgatcacacccagctagagttccac
aatgtggagactggtattgtgacggagaagcgctacatacccgccgtgccctccaatttc
atcggccaccttcagggcctggcgctgaacggcatgccttacatcgacctgtgtaagaac
ggcgacatcgactactgcgagctcaacgctgttatcggctataagaccattgtggctgac
cccgtcaccttccgctcgcgctccagttttgtcacactgcccacactacaggcctactac
tccatgcatctcttcatgcagttcaagacaacctcccccgacggccttattctctacaac
aggggagacggcaatgacttcatagtggtagagctggttaaaggttaccttcactacatc
tctgacctgggcaatggagcgcacctgatcaagggcaactctaacagtcctctaaatgac
aaccactggcacaatgtgcacatttccagagatacgaacaatcttcacacggtcaagatt
gacaccaaagtcaccacgcagaccaccacgggcgccaagaatctcgacctaaagggtgac
ctgtatatcgggggcgtctccaaagaaatgtaccgggacctacctaagctggtccattcc
cgcgaaggatttcaaggttgcctagcaacagttgatctaaatggccggctccctgacctt
ttggctgatgccttggcaactatgggacaagtagagagaggctgtgaaggtcccagcact
acctgtcaggaagactcctgctcaaatcagggagtttgtttgcagcagtgggagggtttc
acctgcgactgcagtatgacttcatacgctgggccactatgcaatgatgctgggacaact
tatatcttcggccgtgatggaggcgtggtggtttacacatggccccctaatgaacgtccg
agcaccagggcagacaggcttgcccttggattcagcactcaacaaaaacacgctactctg
ctccgggtggacagcgcatctggcctgggagactacctacagctgcagatagacaaaggc
aacattagagtagtgtttaatgttggcactgatgacatcaacatcgaggagagcaccaag
tttgtcaacgatgggaagtaccacataattcggttcacccgcagcggaggcaatgctacc
ctccaactggacgacctgcctgtcatagagcgctatccctcaggcaacattgataacgag
cgcctggccatcgccagacagcgaatcccctatcggctcggtcgagtagttgacgattgg
ctactcgacaaaggtcgccagctgaccatcttcaacagccagacaacggtgcgtgtcggt
ggagccgagcgaggcgctggcatgttccaaggtcagctctccggcctctactacaacggc
ctccgcatcctcaacatggccgccgaggggcacccgcacatcagggtggagggcagcgcg
cgactggtgggcgacatgccgtcctcctccatcaccccgcagtccagtgctgccgctggt
ggcaaccgctcagactccgccccctcccttagtgacatcacaaccaccacagcctctaac
aggaaacagggcgccacacagcagtcggcagacgatttgctggtggcgtcagcggaatgt
ccaagtgacgatgaagacattgacccctgtgaccccagttcagcccgtccccccctgacg
gaggtgaaggtgttcccaggtccgtccgaggtggtgcgggagagcagcagcaccactggc
atggtggtgggcatcgtggcagccgctgccctctgcatcctcatcctcctctacgccatg
tacaagtaccgcaaccgcgacgagggctcctaccacgtggacgagagccgtaactacatc
agcaactcggccacacagcccaatggcagcgccaaggacaagccactgggcatcgccaag
atctccaagaacaagaagaacaaagataaggagtactacgtctga
DBGET
integrated database retrieval system
