Scomber scombrus (Atlantic mackerel): 134003527
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Entry
134003527 CDS
T10651
Name
(RefSeq) vinculin
KO
K05700
vinculin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04510
Focal adhesion
ssco04517
IgSF CAM signaling
ssco04518
Integrin signaling
ssco04519
Cadherin signaling
ssco04520
Adherens junction
ssco04810
Regulation of actin cytoskeleton
ssco04820
Cytoskeleton in muscle cells
ssco05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
134003527
04518 Integrin signaling
134003527
04519 Cadherin signaling
134003527
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134003527
04520 Adherens junction
134003527
09142 Cell motility
04820 Cytoskeleton in muscle cells
134003527
04810 Regulation of actin cytoskeleton
134003527
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
134003527
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
134003527
04147 Exosome [BR:
ssco04147
]
134003527
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
134003527
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
134003527
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Mob_Pre
Motif
Other DBs
NCBI-GeneID:
134003527
NCBI-ProteinID:
XP_062298742
LinkDB
All DBs
Position
21:15431643..15460829
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AA seq
1066 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKD
TVQTTEDQIMKRDMPPAFIKVENACTKLVQAASMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVESMEDLITYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPILISGIKIFVTTKTSGSQGVEEALKNRNFTFEKMSAE
INEIIRVLQLTSWDEDAWANKDTEAMKRALGLIDSKIAQAKNWLRDPNAQPGDAGEQAIR
QILDEAGKVGELCAGKERRDILGTAKTLGQMTDQVSEMRARGQGASPAAMQKAQQVSQGL
DVLTGKVENAARKLEAMTNSKQAIAKRIDAAQNWLADPNGGPEGEENIKAVLTEARKIAD
MSEDPKERDDILRSIGEIAAMTAKLSDLRRQGKGDTPEARALAKQIATALQNLQSKTNKA
VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDSGVGQAAIRGLVAEGRRLANALPGPYRQE
LLGKCEQVEQLMAQLADLAARGEGDSPQARAVAQQLQEALKDLKGKMQEAMTQEVSDIFS
DTTTPIKLLGVAATAPLDAPNRDEVFDERAANFEHHANKLGTTAEKAAAVGTANKSTVEG
IQAAVKSTRDLTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDLDKCRVAMANHQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EVVKAASDELSQTISPMVMDAKAVAGNIQDPSLQKGFLDSGYKILGAVAKVREAFQPQEP
DFPPPPPELDQLNLNDEAAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGDMVNEPMMV
AARQLHDEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKASDE
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQAT
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLHWVRKTPWYQ
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgccggtttttcacacgaagacgatagaaagtatcctggagccggtggctcagcagata
tcccatctggtgataatgcacgaagaaggtgaagttgacgggaaagctattccagatctg
acggcgcctgtcgctgccgtacaggcggctgttagcaaccttgttcgagtggggaaggac
actgtacaaaccacagaggatcagatcatgaaaagggacatgccaccagcttttatcaaa
gtggagaatgcatgcactaagctggtgcaggctgcctctatgctgaaagccgatccatac
tctgttcctgctcgggattacctcatcgatggctcccgaggtatcctctctggaacatct
gacctgctcctgacctttgatgaggcagaggttcgcaaaataatccgtgtgtgcaaaggc
atcctggagtacctgaccgtggcagaggtggtggagtctatggaggacttgatcacatac
acaaaaaatcttggaccaggtatgacaaagatggcaaagatgatagatgagcgacagcag
gagctgacacaccaggagcaccgcgtgatgcttgtcaactccatgaacacagtcaaagag
ctgctgcccatcctcatctcaggtatcaaaatatttgtgacaaccaagacatctggcagc
cagggagtagaggaggccttgaagaaccgtaacttcacttttgagaagatgagtgcagag
atcaacgagatcattagagtgctgcagcttacgtcctgggacgaagatgcctgggccaac
aaggacacagaggccatgaagagagctctggggctcattgactcgaagattgcccaggct
aagaactggctgagggatccaaatgctcaaccaggagatgcaggcgagcaggccatccga
cagattcttgatgaagctgggaaagttggtgaactgtgtgcagggaaggaacgcagagat
attctgggaacagccaagaccctgggccagatgactgaccaggtgtctgaaatgagggcc
agaggtcagggggcgtccccagctgcaatgcagaaggcccagcaagtttcccaaggactt
gacgttctcacaggcaaggtggaaaatgctgcccgtaagctggaggccatgactaactcc
aagcaggccatcgctaaaaggatcgatgctgcacagaactggctggcggaccctaatgga
ggtccagagggagaggagaacatcaaagctgtcctcactgaggccagaaagattgcagac
atgtctgaggatcccaaagaaagagatgacatcttgcgctctattggagagattgcggca
atgactgccaaattgtctgatctcagaagacagggtaaaggtgacactcctgaggccaga
gctcttgctaaacagatcgccacagctctgcagaacttgcagtccaagactaacaaagct
gtggccaacagcaggcctgcaaaggcagctgttcacttggaaggaaagattgagcaggcc
cagcgctggattgacaatcccaccgtggatgacagtggtgtgggccaggcagctatccgt
gggcttgttgcagagggccgcaggctggccaatgctctcccaggcccgtacaggcaggag
ttgctgggtaaatgtgagcaggtggagcagctcatggcccagctggctgacctggctgcc
cgtggtgaaggggactcccctcaggcacgtgctgtggctcagcagctccaggaggcattg
aaagacctgaaaggaaaaatgcaagaggcaatgacgcaggaggtgtcagacatcttcagt
gacaccaccacacctatcaagttactgggagtggctgctactgccccactggacgccccc
aacagggatgaggtctttgatgaaagggctgccaactttgagcaccatgccaataagctt
ggcaccacagcagagaaggctgctgctgtcggaactgccaacaagagcacagtagaggga
atccaggctgctgtcaagtcaacaagagacttaacaccacaagtggtttctgctgctcgt
atcctgctgagaaatcccggtaatcaagctgcatatgaacattttgagacaatgaagaat
caatggattgacaatgtggagaaaatgacaggtttggtggatgaggccatcgataccaaa
tctctgctggatgcatcagaggaggccatcaagaaggacctggataaatgccgtgtggcc
atggccaatcaccaacctcagatgctggtggctggtgccaccagcattgcccgcagggcc
aaccgaatcctcctggtggcaaagcgagaggtggagaactctgaggatcctaaattccgg
gaagtggtgaaggctgcatctgatgaactgagccaaacaatctctcccatggtgatggat
gcaaaagcagtggcaggaaatatccaggatccaagtcttcagaagggctttctggactca
ggttataagattcttggtgctgtggcaaaggtcagggaggccttccagcctcaggagcca
gacttcccaccacctcctccagaactggatcagcttaatcttaatgatgaagcagcacca
cccaagcctcctcttcctgagggtgaagttcctccccccagacctcctcccccagaggag
aaagatgaagagttccctgagcagaaggccggtgatatggttaatgagcccatgatggtg
gctgccaggcagctccacgatgaagcccgcaaatggtccagcaaaggaaatgacatcatt
ggtgcagccaagcgaatggccttgcttatggctgaaatgtcccgtctggtgcgcggaggc
agtggaaacaagcgtgcccttatccagtgcgccaaggacattgctaaggcttctgatgaa
gttacacggctggccaaggaggtggccaagcagtgtactgacaagcgtatccggaccaac
ctgctccaggtgtgtgaacgtattcctaccatcagcactcagcttaaaatcctgtccaca
gtcaaggccactatgttgggtcgtaccaacatcagcgaagaggagtcagagcaggctact
gagatgttggtgcacaatgctcagaatttgatgcagtctgtgaaggagacggtcagggag
gcagaggcagcctctatcaagatccggacagatgcaggcttcaccctccactgggtcaga
aagaccccctggtaccagtaa
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integrated database retrieval system
