Scomber scombrus (Atlantic mackerel): 134003574
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Entry
134003574 CDS
T10651
Symbol
ntn2
Name
(RefSeq) netrin 2
KO
K06843
netrin 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
134003574 (ntn2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ssco00536
]
134003574 (ntn2)
Glycosaminoglycan binding proteins [BR:
ssco00536
]
Heparan sulfate / Heparin
Axon guidance molecules
134003574 (ntn2)
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Paralog
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
BNR_6
Motif
Other DBs
NCBI-GeneID:
134003574
NCBI-ProteinID:
XP_062298795
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All DBs
Position
21:complement(11320747..11347876)
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AA seq
632 aa
AA seq
DB search
MREPWRCLLCLCLLACSASTHSAANPFAGQQTPPDPCYDDTGAARRCIPEFINAAFGKEV
MVSSVCGRPPSRSCSVVERGDDRPSVRTCQICDAADTRRSHPASYLTDLNSAHNLTCWQS
ENLNISPYNVTLTLSLGKKFEITYVSLQFCSPRPESLAIYKSMDYGKTWMPYQFYSSQCR
RMYNRPNKATITKQNEQEALCTDGHTDLYPLSGGLIAFSTLDGRPSGKDFDNSPVLQDWV
TVTDIRVVFSRPQIPRELGAGSNSGGRDDDPMAVTSTLPTYFYAVGDFQVGGRCKCNGHA
SRCLKDKEGKLVCDCKHNTEGPECDRCKPFHYDRPWQRASAREANECLPCNCNLHARRCR
FNMELYKLSGRKSGGVCMNCRHNTAGRHCHYCKEGFYRDMARPITHRRACKACDCHPVGA
AGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQSRSPVAPCIKIPVVNPTAVVSSTEEPAD
CESYCKPVKGNLKINMKKYCKKDYAVQVNVLDMETVGDWAKFSVSVVSVYKSRGEPLKRG
DNILWVHMKDLACKCPKIQMSKRFLVMGGSDGGTGTATGPGVGPGPGATNPGAERVGLVA
DKNSLVIQWRDVWTRRLRKFQRKEKKGKCSKA
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaccctggaggtgcctgctgtgcttgtgcctcctggcatgctcagcctccacc
cacagcgccgccaatccctttgcagggcagcagacccctccggacccttgctatgacgac
acaggtgcagctcgccgctgtatcccagagtttatcaatgctgcctttggcaaggaagtg
atggtgtccagtgtctgcggccggcctccctcccgttcctgcagtgtggtggagcgaggt
gatgatcggccttctgtgcgtacgtgccaaatctgtgatgctgcggatactcggcgctcc
caccctgcttcctacctcaccgacctcaactcagctcacaacctcacctgctggcagtcg
gagaatctgaacatctcgccatacaacgtgactctaacactctcactgggtaaaaagttt
gagatcacctacgtcagcttgcagttctgttcaccacgacccgagtcgctggccatatac
aagagcatggactacggcaagacatggatgccctaccaattctactcctcacagtgccgg
cgtatgtacaatcggcccaacaaagcaacgataacaaagcagaatgaacaggaggctcta
tgtacagatggccatactgacctctatccactctccggaggactcattgctttcagcact
ctggatggacggccctctggcaaagactttgacaacagcccggtccttcaggactgggtg
acagtcaccgatatccgtgtagtctttagccgaccccagataccccgggagctgggggct
ggaagcaacagtggagggagggacgatgacccgatggcagtgacatcaacactgccaact
tatttctatgcagtgggagacttccaggtgggcgggaggtgcaaatgcaatggacatgcc
tcacgctgtctgaaagacaaggaaggcaaactggtttgtgactgcaagcacaacacagag
gggcctgaatgtgaccgttgcaagccttttcactatgaccgaccgtggcagagggccagc
gcacgagaagccaatgagtgtttgccatgtaactgcaacctacatgcccgccgctgtcga
ttcaacatggagttgtacaagctgtcggggaggaaaagcggaggggtctgcatgaactgt
cgccacaacaccgcaggccgccactgccactactgcaaggaaggcttttacagggacatg
gccagaccgatcactcaccgacgagcctgcaaagcctgtgactgccaccctgtgggcgca
gcaggcaagacgtgcaaccagaccacaggccagtgcccctgcaaggacggtgtcaccggc
atcacctgcaaccgttgcgccaagggctaccagcagagccgctcacccgtggccccctgc
atcaaaatcccagtggtcaatcccacagctgtggtgagcagcacagaggaaccagcagat
tgtgagtcctactgcaaaccagtgaaaggcaacctgaagatcaacatgaaaaaatattgc
aagaaggattatgcggtccaagtgaacgtgctggacatggagacggtgggggactgggcc
aagttttcggttagtgtggtgtctgtgtacaagagccgcggcgagcccttgaagcgtggc
gacaacatcctgtgggtacacatgaaggacctagcctgcaaatgtcccaagattcagatg
agcaagcgcttcctggtaatgggcggcagtgacgggggaacaggcacagcgacaggaccg
ggggttggacctgggcctggagccaccaacccaggggcagaacgcgtgggcctggtggct
gataagaacagcctggtgatccagtggagggacgtttggacgagacgcctgaggaagttc
caacgcaaagagaaaaaggggaagtgcagcaaagcgtga
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