Scomber scombrus (Atlantic mackerel): 134003604
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Entry
134003604 CDS
T10651
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssco03036
]
134003604 (mms19)
03400 DNA repair and recombination proteins [BR:
ssco03400
]
134003604 (mms19)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
134003604 (mms19)
DNA repair and recombination proteins [BR:
ssco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
134003604 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
API5
Motif
Other DBs
NCBI-GeneID:
134003604
NCBI-ProteinID:
XP_062298829
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Position
21:7925021..7939449
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AA seq
1030 aa
AA seq
DB search
MMADESALLLSLVEEFVSGLQDSKAKDTATAVKDGQFTVLQLVEALGLSLTSSQPHTRAR
GVQLLSEVLHECYGDLTEREVEVLISFYENRLKDHYVITPPVLQGLRALTKCNALPPGSA
VSMLRSLFQDVHVQSLMLTERGCVYNMLINLMDTREAELKGLGADFVFGFVQSMDGERDP
RNLLLAFQIAKNIIHRGYDLGKFTEELFEVTSCYFPIDFTPPPNDPHGITRDQLILMLRA
VLTGTPKFAEFLLPLIIEKLDSDVQSAKQDSLQTLAACVSQYEHKDLAEFLEGLWTSLRR
EVFQTSSEKIESAGLAALTALTSCLSRSVLNSDSDDSLNTFLDLVLKDCKHHLCEPDLKL
VWPSAKLLQAACSASNRASHIITAAVMPTLIEQYNNRAECSHRRTLLEVVQRFILSVKSS
QSSESEESVLSAFRPSLCSMVFSALSESNANLQITATSALTSLSQQTGLLLDSDIELAVD
HLTGLLLKEDDNSVSAAVVECAGALAQLHPTAFITKLIPELKKQMFSEPMEQDREASEQQ
SHHAMRQRCLSALAAVSTQPSVVQESTPVLLEVLSSAHTGSVSFSVEEVVLACCSLQRIA
EQVKDTEETGRCFHDVIIPRLLSLALQAALQGDGSPGRRSPLVEEAVLSAMVRVISTSCS
RLQPTMAGQTTSKAVSLFLDGDVSFLPDNSFPSNIQLLKKQQGDSWSQSQMVCLLMGCVC
SLPRSVEVPQIDRLLSELEEMSYTCSHPLSYTSAAKCFAGLVNKRPQGDSLDSLIQRTMK
RICSELDSTSSSVRYQAFTLMIWVAKALLLRYHPLFTALTDKLFSLLDDADLGPMAADSF
SLLMSDSADILNRGCHADTRIMYRQRFFSENSAKLVQGFNAAPQEKKPNYLKALSNIVNK
LPKQVQVTELPALLSLLLEALSCPDQGVQLSTLSCLEPVLIDPPPALIQQLEALVSRLLA
LTSSPAMDVRIVSLRCIHALSRFPVHEILPFRARVLRALARPLDDKKRMVRSEAVQARGE
WFLIGSPGGR
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgatgaaagtgccttgctgctctctctggtggaggaatttgtctcggggctg
caggacagcaaggccaaagatacagcaacagctgtcaaagatgggcagtttacagtactg
cagctggtggaagcactggggctgagtctgactagttctcagcctcacactcgagcaaga
ggagtccagctgctctcagaggttttacacgagtgctatggagatcttacagagagagaa
gtggaagtgctcatctctttctatgaaaaccgtcttaaggaccattacgtcatcacaccg
cctgtcttacaggggctccgagcgctgactaaatgtaatgccttgcctcctggctcggct
gtttccatgctgaggtctttgttccaggacgttcatgtgcagtcactgatgctaacagag
agagggtgcgtctacaacatgctcatcaacctcatggacaccagagaggccgagctgaag
ggccttggtgcagactttgtgtttgggtttgtccagtcaatggacggggagagagatcct
cgcaacctcctgttagccttccaaatcgccaagaacatcatccacagaggttacgatcta
ggtaaattcacagaggagctgttcgaagtgacgtcctgctatttccccatcgacttcacc
ccccctcccaacgacccccacggcatcaccagagaccaactcatcctgatgctgagagcc
gttctcaccgggacaccaaaattcgcagagttcctgctgccgctcatcattgagaagctg
gactcagacgtgcagagcgcaaagcaggactcactgcagacactggctgcttgtgtgtca
caatatgaacataaagacttggcagagttcctggaaggactgtggacgtcgctgcgcaga
gaggtgtttcaaacatccagcgagaagatcgagtctgcaggcctcgctgctctcaccgcg
ctcacttcctgtctgtctcgctcggttctcaactccgactctgacgactccctcaacacc
ttcctggatctcgtgctcaaagactgcaaacatcacctgtgtgagccggacctgaagctg
gtgtggcccagcgccaagctgctgcaggccgcctgcagcgcctccaacagggcgagccac
atcattacagccgctgtcatgcccacactcatcgagcagtacaacaacagagctgagtgt
tcacacagacggacgttactggaggtggtgcagagattcatcctctcagtaaaaagcagc
cagtcctcagagagcgaggagagcgtgctttcagctttccgtccgtctctgtgcagcatg
gtgttctcagctctgtcggagagtaacgccaatctgcagatcacagccacgtcggcgctc
acctcactatcacagcaaacaggtttgctgttggactccgacatcgagctggctgtagat
cacctgactggactgctgctgaaagaggacgataacagcgtcagtgctgctgtggttgag
tgtgctggagccttagcacagctgcacccaacagcattcatcactaaactgatcccagaa
ttaaagaagcagatgttttctgaacccatggagcaagacagagaagcgtccgagcagcag
tcccatcatgcaatgcgtcagcgctgtttgtccgcgctagctgcggtgtccacccaaccc
agtgtggtccaggagagcacacctgtcctcctggaggtcctcagttcagcacacacaggt
agcgttagtttctcggtggaggaggtggtgttggcgtgctgcagcctccagaggatagca
gagcaggtcaaggacacagaggagacgggacgatgcttccacgacgtcatcatcccgcgc
ttgctgtctctagcgctccaggcggcgctgcagggtgatgggtcacctggtcgtcgtagt
cctctggtggaggaggcggtcctgtctgccatggtccgtgtcatcagcacttcctgctcc
aggctgcagcccacgatggcaggtcagacgacatcaaaggccgtgtctctctttctggat
ggtgacgtctcctttttgcccgacaactccttcccttcaaacattcagctgctcaagaag
cagcagggagactcatggagccagtctcaaatggtttgtcttctgatgggctgcgtgtgt
tcgttgcctcgcagcgtggaggtgccgcagatagaccgcctgctgtcagagctggaggag
atgagctacacctgcagccacccactgtcatacacctccgccgccaagtgttttgctggc
ctggtcaacaaaagaccacagggtgattctctcgacagtctgattcagaggacaatgaag
agaatatgcagtgagttggattctacgtcttcgtctgtgcgctaccaagcgttcaccctc
atgatctgggttgccaaagctctgctcctcagataccacccgctgttcacagcactgact
gacaagctcttctctctgcttgacgatgctgatctgggtcccatggcagcagacagcttc
tcgctgctgatgagcgactccgctgacatcttgaaccgtggttgccacgccgacacacgc
atcatgtaccgccagcgcttcttcagcgagaattcagccaagttggttcagggcttcaac
gcagctcctcaagaaaagaagcccaactacctgaaagctctgtccaacatagtcaataaa
ctgcccaagcaagttcaagtcactgaactaccagcgctcctgtcactgctgctggaggcg
ctgtcatgtcctgaccagggcgtccagctgtccaccctgtcctgtctggagcccgtcctc
atagacccgccaccagcactcatccagcagctggaggctttggtcagcaggctgctggcc
ctcacctctagtccagccatggatgtcaggatcgtttcactgcggtgcatccacgccctc
tcccgcttccctgtacacgagatcttgccgtttcgggcgcgggttttgcgagctttggcc
cgacctctggatgacaagaagaggatggtgagaagcgaggcggttcaggcacgaggagag
tggttcctcataggaagtcctggtggaaggtga
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integrated database retrieval system
