Scomber scombrus (Atlantic mackerel): 134003605
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Entry
134003605 CDS
T10651
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
134003605 (vps35l)
Membrane trafficking [BR:
ssco04131
]
Protein recycling
Others
Retriever complex
134003605 (vps35l)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
134003605
NCBI-ProteinID:
XP_062298830
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All DBs
Position
21:7949829..7962600
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AA seq
969 aa
AA seq
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MAAVQWRSRGRNYEAELQRCRPEAAPVEFGDYHPLKPIMVTDTKTRRGARKGSTSSSSSS
SSSAAPDPLSSMLDGTDPLSMFAAASATETPALSHSASTGDLGRKKREKETEEAVGPDFE
PWSVKRGEILARFTTTEKLSINLFMGSDKGKAPSPGSSAVSEKVRTRLEELDDLEEGSQR
ELLNLSQQDYANRIEELNQSLKEAWASDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLI
TDILDTFGRLVYDRIWTMCSDPRPLSDSFTVDDVNDTAKETCLNWFFKIASIRELLPRLY
VEAAILKCNRFLNKSGIQETLPRLTAMIRGIGDPLVAAYTRAYLCRVGMEVAPNLKDSLN
RNFFDLLGSFRQISSESVQNQLVQQRVEVPEYLTLYSPAINWILQCIAYRAPEPLLTEMM
ERCKKLGNNALLLNSVMRAFRPDFVATRATDFIGMIKDCDEAGFPKHLLFGSLGRSLACA
DPPESERLTILNEAWKVITKVRSPRDYINCAEIWVEFTCRHFTKRENNTVMADIIKHMTP
DRAFEDAYPQLQSVIRKILTYFNDFSVLFSMERFLPFLDMFQKDSVRVEVCRSIMEVFIK
HQLEPTRDPVILNAMLHICKTMHDSVNALTLDDEKRSLSLLIIGFIRMVCFGRDFEQQLS
FCVEARATFCNLEPVLVQLIHTVNQLAMETRRVMRENHSRKTAAFVRACAAYSFITIPSL
SSIFSRLSLYLQSGQVALANQCLSQADAFLKAAVSILPDVPRSISIEGKLRSSESFLMDF
INNFLATLLVIPDHPEHGVLYLVRGLLNMVQDYTWEDNSDAKVRVYVSALPLLAAMSQET
YLYSIPKVDSNETLYGGDPKFLSEINKLCETLIGQVLDHLKSLGRDEHSTRRQGALAFSL
FGVLLAHGDLRNNKLSQLAVNLWNLSHKHGYCDTRVSVRTLESIKQQAVQHDMSHLSDTV
QRLTLQSRT
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggtgcagtggcgttcccgcggacgcaactatgaagcagagctgcaaaggtgt
cgtcctgaggcggctcctgttgagtttggagactaccatcctctcaaaccaatcatggtg
acagacaccaagacccgccgcggggctcgtaaaggcagcacctcctcctcttcctcctcc
tcttcctccgctgccccggaccccctcagctccatgctggacggtaccgaccccctgtcc
atgtttgccgcggcctcggccaccgagactccagccttgtcacacagcgcctccacaggg
gatcttgggaggaagaagagagagaaagagacagaggaggcggtgggaccagactttgag
ccctggtcagtgaagagaggagagattctggccaggtttacaaccaccgaaaaactctca
attaatctcttcatgggctctgataaaggaaaagctcccagtcctggatcctcagctgtg
tcagagaaggtccgcactcgcctggaggagttggatgatctggaggagggttcccagaga
gagctgctgaacctctcccagcaggattatgccaaccgcattgaggagctaaaccagtcc
ctgaaggaggcctgggcctctgatcagaaagtcaaagccctgaagattgtcatccagtgc
tccaagcttctgtctgacacctctgtgatccagttctaccccagcaagtttgttctcatc
actgatatcctcgacactttcggccggctcgtgtacgacagaatctggaccatgtgttct
gacccacgacctttgtctgattccttcacagttgatgatgtgaatgacacggccaaggag
acgtgcctcaactggttcttcaagatcgcctccatcagagagctcctgcccagactatat
gtggaggctgccatcctcaagtgcaatcgcttcctgaacaaatctggcattcaggagact
cttcctcggttgacggccatgatcagaggtatcggagaccctttggtggctgcgtatacc
agagcttacctctgcagggtgggcatggaagtcgcccctaacctgaaagacagcctgaac
cgcaacttcttcgacctgctcggctccttccgtcagatcagcagcgagagcgtccagaac
cagctggtccagcagagggtggaggtgccagagtacctgaccctttactcacccgccatc
aactggatcctgcagtgtatcgcctacagagctccagagcctctcctaacagagatgatg
gaaagatgcaagaagctggggaacaatgccttgctgctgaattcagtaatgagggccttc
agacctgactttgtagcgaccagagcgacagacttcatcggtatgattaaagactgcgac
gaggccggcttcccaaagcatctgttgtttggatctctgggtcgcagtctggcgtgtgcc
gaccctccagaatccgagaggctgaccatcctcaatgaagcctggaaggtcatcaccaaa
gtccgcagtccacgggattacatcaactgcgccgagatctgggtggagttcacctgccga
cactttacaaaacgtgagaacaacactgttatggctgacatcatcaaacacatgacccct
gatcgggcgttcgaggacgcctatcctcagctgcagtcggtcatcaggaagatcctcacc
tacttcaacgacttctccgtcctcttctccatggagcgtttcctgccttttctagacatg
ttccagaaggacagtgttcgggtggaggtctgcagatccatcatggaggtcttcatcaaa
caccagctggagcccaccagagaccccgtcatcctcaacgccatgctgcatatctgcaag
accatgcacgactcagtcaacgctctcactctggatgacgaaaaaagatctttgtctctg
ctgatcatcggcttcatccgcatggtttgttttggtcgtgacttcgagcagcagctgagc
ttctgcgtggaggccagagccacgttctgtaacctggagccagtgctggtgcagctcatt
cacacggtgaaccagctggcgatggagaccaggagggtgatgagagagaatcactccaga
aaaacagcagcattcgtcagagcgtgcgctgcctacagtttcatcaccatcccgtctctc
agcagcatcttcagtcgtctcagcctctatctgcagtctggccaggttgcattggctaac
cagtgtctctcccaggcggatgccttcctaaaggcagcggtcagtattcttccggacgtt
cctcgctccatcagcattgaggggaaacttcgctcctctgagagtttcctaatggacttc
atcaacaacttcctggccaccctgctagttatcccggaccacccagagcatggtgtgctc
tatctagtccgcggtctgctcaatatggtccaggattacacctgggaggacaacagcgac
gccaaggtgcgggtctacgtcagcgcactgcccctgctggccgccatgagtcaagaaacc
tacctctactccatccccaaagtggattccaatgagacactttacggaggagaccccaag
tttctatcagagatcaacaagctgtgtgagaccctgattggacaggtcctggaccacctg
aagtctctcggtcgggacgagcatagcacacggcgtcagggcgctctggccttctctctg
ttcggcgtcctgctggctcacggtgacctgaggaacaacaagctgagccagctggccgtc
aacctgtggaacctcagccacaaacatggatactgcgacacacgagtctctgttcggact
ctggagtccatcaaacagcaggctgtgcagcacgacatgtctcacctgtcagacacggtc
cagagactcacactgcagtcccgcacctga
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