Scomber scombrus (Atlantic mackerel): 134003691
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Entry
134003691 CDS
T10651
Symbol
tbkbp1
Name
(RefSeq) TANK-binding kinase 1-binding protein 1
KO
K12652
TANK-binding kinase 1-binding protein
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
134003691 (tbkbp1)
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Gene cluster
GFIT
Motif
Pfam:
TBD
Zn-C2H2_12
Fib_alpha
PHM7_cyt
Cnn_1N
DUF7376
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
134003691
NCBI-ProteinID:
XP_062298940
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All DBs
Position
21:22862972..22900174
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AA seq
639 aa
AA seq
DB search
MQSLFGGGELGLLGGGGDAGGLKEDGCGSVAWRSSHMPPDDVYSASHIALITAYQDIKTR
LACLERENSSIKRKLKIYEIKFPMISEFGEDTNSYCSFESKETALLHSENGNLQQRVNIL
THELQKRKEREEQLEDVIQAYEKIHMEKSNLQRDLDKMTSLVEKHVERILGLESALRQRD
SSLQKINMQLHSKDMQYLQLHAGPDTHRLDCPGLTLQSSRSLDALSDLKLQQLEAELEGA
RHEAQGACQREEELKAECERLKEEMRQLQNSQREREMTSPCKQCDVEWIKKVGDEQVNLA
LAYTELTEELGRLQALSSKQTEILRKASQEQASPVQRHSPIHHQRHSPVPQRHSPISQRH
SPVPPPSHHSPIQQRRSPVVLQRLSPDMHRRSPLLDINNGPASYSCRPPTQHLRASFQGR
RSYSEVADPSAYQCPPRFSLDPVATLPKPRPYVEGYVKQQPQHGGSPHGGLQHRGSPSPH
QGGGGDGGHGESSMRHSREMPFPLSEVAHLRFEPPPPPTPAPQPPQSSEDEEEWTCPHPI
SPPRTLGVLSNAVPSSVMRGPASCSAFPIPQRPNTLSCHPQPGYMSAEHAQSWPSINLWM
ETEESDMRSCPLCQLIFPVGYPDDALIKHIDSHLENSKI
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctctgtttggcggaggggagctggggctgctgggaggaggcggcgacgcaggg
ggtctgaaggaggatggctgtggcagcgtggcgtggcgttcctcgcacatgccccccgat
gatgtctactcagcctcccacattgcccttatcaccgcttatcaggacatcaagacgagg
ctggcctgcctggagcgagagaacagcagcatcaagaggaagctcaagatctatgagatc
aagttccctatgatcagcgaatttggggaggacaccaactcctactgctcctttgagagc
aaagagacggcactgctgcactcggaaaatggcaacttgcagcagagagtcaacatcctg
acccacgagctccagaagaggaaggagagagaggagcagctggaggatgtgatccaggcc
tacgagaagattcacatggagaagagcaacctccagagggatctcgacaagatgaccagt
ctggtggagaagcacgtggagcgtatcctgggcctggagtccgctctgaggcagagggac
agctctctgcagaaaatcaacatgcagctgcacagcaaagacatgcagtacctgcaactc
cacgccggcccagacacccacaggctggactgtccaggcctgacccttcagagctcccgc
agcctggacgccctgtcggatttaaagctgcagcagttggaggcggagctagaaggggcg
cggcacgaggcccagggggcgtgtcagcgggaagaggagctgaaggccgagtgcgagaga
ctgaaggaggagatgagacagctgcagaacagccagagggagagggaaatgacttctccg
tgcaagcagtgtgatgtggagtggataaagaaggtgggagatgagcaggtgaatttggct
ctggcttacacagagttaactgaggagctgggtcgcctccaagcgctgagctccaagcag
acggagatcctgaggaaagcctcgcaggagcaggctagtccagtccagcgtcactctccc
atccaccaccagcgccactctccagtacctcagcgccattcacccatctcacagcgccat
tctccggtcccgcctccgtcgcaccactccccgatccaacagagacgctccccggtggtg
ctgcagcgcctctcccctgacatgcaccgccgctcacccctgctggacattaataacgga
ccggcttcttactcctgccggccgcccacccagcacctgcgggccagcttccagggccgc
cgcagttactccgaggttgcagacccctcggcttaccagtgcccgccccgcttctccctg
gaccctgtcgccaccctgcctaaaccacggccctacgtcgagggctatgtaaaacagcag
ccgcaacatgggggctctcctcatggtggactgcaacacaggggatcgccctctcctcat
caaggtggcggaggagacgggggtcacggggagagctccatgcgccactcaagagagatg
ccattcccgctgtctgaggtggcccaccttcgctttgagccgcctccacctcccacaccg
gccccccagcccccacagtcctctgaagatgaggaggagtggacctgcccacatcccatc
agcccgccacggacgctgggcgtgctctctaatgccgtgcccagtagtgtcatgagaggc
ccggcgtcctgctcagccttccccatccctcagcggcctaacaccctcagctgccacccg
cagccagggtacatgtcagcggagcatgcgcagtcctggccttcaatcaatctctggatg
gagaccgaggagagcgacatgcggagctgccctctctgccagctgatattccccgtcggt
taccctgacgatgccctcatcaagcacattgactcccacctggagaacagcaagatctga
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