Scomber scombrus (Atlantic mackerel): 134003711
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Entry
134003711 CDS
T10651
Symbol
zranb1a
Name
(RefSeq) ubiquitin thioesterase Zranb1
KO
K11862
ubiquitin thioesterase ZRANB1 [EC:
3.4.19.12
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssco01002
]
134003711 (zranb1a)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
134003711 (zranb1a)
Enzymes [BR:
ssco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
134003711 (zranb1a)
Peptidases and inhibitors [BR:
ssco01002
]
Cysteine peptidases
Family C64
134003711 (zranb1a)
Ubiquitin system [BR:
ssco04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
134003711 (zranb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AnkUBD
OTU
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
134003711
NCBI-ProteinID:
XP_062298966
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All DBs
Position
21:16994673..17015243
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AA seq
713 aa
AA seq
DB search
MTEQKEKWSCDYCTYENWPSAVKCTMCRAQRSRGPIITEEPYKIGTDLDASLEWDPPRTE
SGSSLLICPDSSARPRVRSACMSEIANKWSCQMCTYLNWPRAIRCTQCLCQRQRTCSPTE
SPQTSGSNAGCRPAPHSPVDTCEEYNDRNRLNTHQQHWTCTACTYQNWPKTTKCVVCDHP
NPNSHEAIELGEPAEPSLLINEQDRARWRSGCSGSQGQRRSPPLPKREDNVKMDFQRIEL
AAGAMSGKEEQEIDFKKLKQIRNRMRKTDWLFLNACAGVVEGDLAAIEAYKSSGGDIARQ
LTADEVQLLSRSSAFDVGFTLVHLAIRFQRQDMLAILLTEVNHQAAKCIPSMVCPELTEQ
IRREIAASLHQRKGDFACYFLTDLVTFTLPADIEDLPPAVQEKLFDEVLDRDVQKELEEE
SPVINWSLELGTRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKTLHDSLHDCS
HWFYTRWKEWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGASLEQTHIFVLAHILR
RPIIVYGVKYYKSFRGETLGYTRFQGVYLPLLWEQSFCWKSPIALGYTRGHFSALVAMEN
DGYDNRGAGANLNTDDDVTVTFLPLVDSERKLLHIHFLSAQEMGNEEQQEKLLREWLDCC
VTEGGMLAAMQKSSRRRNHPLVTQMVEKWLDRYRQIRPCASLSDGEEEEDEDE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacagaaggaaaaatggtcctgtgactactgcacctatgaaaactggccatct
gcagtcaagtgcactatgtgccgtgcacagaggtcgaggggtcccatcatcacagaggaa
ccttataaaataggcactgatcttgatgccagtctggagtgggaccctccaagaactgag
agtggcagcagcctcctcatctgccctgactccagtgccaggcccagggtcaggtcagcc
tgcatgtcagagattgctaataagtggtcctgccagatgtgcacctacctgaactggccc
agggccatccggtgcacacagtgtctgtgtcagcgccagaggacctgcagccccaccgag
tccccccagacttcaggctccaatgcaggctgccgtcctgcaccccactccccggtggac
acctgtgaggagtacaatgatagaaacagactcaacacccaccagcagcactggacatgc
acagcttgcacttaccagaactggcccaaaactacaaagtgtgtcgtgtgtgaccacccc
aatcccaatagccatgaagccatagagctgggtgagcctgcagagccctcacttctgata
aatgagcaggacagggcgaggtggaggagtggttgcagtggaagccagggccagaggagg
tcccctcctttgcccaagagagaagacaatgtcaaaatggacttccagaggatagagctt
gcagctggagccatgagcggcaaagaggagcaagagatcgacttcaagaagctaaagcag
ataagaaacagaatgaggaaaacagactggctgtttctcaatgcatgtgctggtgtggtt
gagggagacctggcggcgatagaagcctacaagtcgtccggtggtgacatcgccaggcag
ctcactgcagacgaggtgcagcttctcagccggtcttcagcttttgatgtaggctttacg
ctagttcatctggccatccgcttccagaggcaggacatgctagccatcctgctcacagag
gtgaaccatcaggcagctaagtgcatcccctctatggtatgtcccgagctgacggagcag
atccgccgggagattgccgcctcactacatcaacgcaagggagacttcgcctgttacttc
ctcactgacctggtcaccttcacccttcctgcagatatagaagacctaccgcctgcggtc
caggagaagctgtttgatgaggttttggatcgagatgtgcagaaagagttggaagaggaa
tctcctgtcatcaactggtctctggagctgggcacacgcctagacagtcgtctgtacgcc
ttgtggaaccgtaccgctggagactgtctgctggactctgtgctgcaggccacgtggggc
atctacgacaaggactctgtcctccgcaagacccttcatgacagcctgcatgactgctct
cattggttttacacacgctggaaggagtgggagtcttggtactcgcagagcttcggtttg
cacttctccctgagagaagagcagtggcaggaagactgggccttcattttgtctctggca
agccagcctggggccagcctggagcagacacacatttttgttctcgcacacattcttcgc
aggccgatcatagtctacggagtgaaatactacaaaagtttccgtggggaaacgttaggc
tacactcgttttcaaggtgtgtacctgcctctgttatgggagcagagtttctgctggaag
agtcccatcgccctgggatacacacggggccacttctccgccctggtggccatggagaat
gacggctatgacaatcgtggtgcgggtgccaacctcaacactgacgatgatgtcactgtc
accttcttgccactggtggacagcgagaggaagctgctgcacattcacttcctgtctgca
caagagatgggcaatgaggagcagcaggagaagctgctgagggaatggctggactgctgc
gtgacagaaggtggcatgctggcagccatgcagaagagctctcgccgccgtaaccacccc
ctggtcacccagatggtggagaagtggttagacagataccgccagatccgcccatgtgcc
tctctctctgatggcgaggaagaggaagatgaagacgaatga
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