Scomber scombrus (Atlantic mackerel): 134003765
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Entry
134003765 CDS
T10651
Symbol
tdrkh
Name
(RefSeq) tudor and KH domain-containing protein isoform X1
KO
K18406
tudor domain-containing protein 2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssco03036
]
134003765 (tdrkh)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Gene silencing
piRNA pathway
134003765 (tdrkh)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
TUDOR
KH_1
KH_Vigilin
KH-I_KHDC4-BBP
KH_PARP14_3
KH_N4BP1_1st
KH_PNO1_2nd
KH_NusA_2nd
Motif
Other DBs
NCBI-GeneID:
134003765
NCBI-ProteinID:
XP_062299078
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Position
21:2745464..2758101
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AA seq
572 aa
AA seq
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MFVFRWSIPLGAQRFMDAVKEGQKSSLSSGKMVALAAGLSVGATVGYIVYRHMSSTYNSE
GPEVELSKMSLPVEVYRNISRYQATFLDMVTQKSGAHVRVLSDSGEPGCKTAVCFVLQGS
KEQVLLARCILENLVTDCQPMTEALEVPQTAFGRIIGRGGENLKLITRTTGVKVACSKEK
TQGPGAKGSVTITGTRQEVKQAKELILEKVREDMMVRTKISQSSALRQKRGQTAANQRAD
STETEAPLGLNNNGPYSQAEKRGVVHANGTTGEPERIFDKVEELKITNTDSKEEEEEESL
STDSLSEVSKFEIPSPDLSFQPDEHLEVYVSASENPNHFWIQILGVRSLQLDKLIEEMNR
FYNSGSPTDQRVETIVVGDIVAAPYREHDSWNRARVLGVLASGLVDLYYVDFGDNGELPK
ESLRRMRSDFLSLPFQAIECNLAGVRPKGEVWTEAALDEFEQLTHCACWRPLQAKLCSYS
HSDISSWPSVKLYDNSEGKTVDIGEELIRLDHAVSFQELVNGKSEGNNLGCLQRMLDDVI
GASSELSLSCISLSEAASISGSVDDVLEDDLL
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgttcaggtggagcatcccgctgggtgcgcagcgcttcatggacgccgtgaag
gagggtcaaaagagctccctgagctcggggaaaatggtggccctggctgcggggctctct
gtgggggccacggtgggctacattgtgtaccgccacatgagcagcacctacaacagtgag
ggccccgaggttgagttatccaagatgtcacttcctgtagaggtgtacaggaacatatcc
agatatcaagccacgtttctggacatggtgacccagaagtctggagctcatgtccgggtt
ttatcagattcgggggaaccaggatgtaagacggccgtgtgtttcgtgctgcagggctct
aaggagcaagtcctgctggctcgctgcatcctggagaacctggtcacagactgccaaccc
atgactgaggctttggaggtccctcagactgcgtttggacgtattatagggcgtggtgga
gagaatttgaaactaatcaccaggaccacaggggtcaaagtggcttgttccaaagagaag
acacagggtcctggtgcaaagggcagcgtcacaatcacagggaccagacaggaagtgaaa
caggccaaggagctgattctagaaaaagtcagagaggacatgatggtgaggacaaagatc
tcgcagtcttctgccctgcgtcagaaacgtggacagacagcagcgaatcagagagcagac
agcacagagacagaagcaccgctgggcctgaataacaacggcccctacagccaggcagag
aagaggggggtggtccacgccaacggaaccactggagaaccagaacgtatttttgataag
gtggaggagcttaaaataaccaacacagacagcaaagaagaagaggaggaggagagtctg
tctacagactcactctctgaagtctccaagtttgaaattcccagtcctgacctgagcttc
cagcctgacgaacatcttgaagtttatgtttctgcatcagagaacccaaaccacttctgg
atccagatcctaggggtccgctccctccagctggacaaactgatagaagagatgaaccgg
ttctacaacagcggcagccccactgatcagagagttgagaccatcgtggtgggggacatc
gtggcagctccataccgagagcacgactcatggaacagggcgagggtgctgggagtcctg
gcctctggactggtggatctttactatgttgactttggggacaatggggagcttcccaaa
gagagcctccgccgtatgaggagtgacttcctcagtttaccattccaggctattgagtgc
aacttagcaggagtgagaccaaaaggagaagtgtggactgaggcagccctggacgagttt
gagcagctgacacactgcgcctgctggagacccctacaggccaaactgtgcagctactct
cactctgacatttcctcctggcccagtgtcaagctctatgacaacagcgagggcaagact
gtagatatcggtgaggagctcatcaggctggaccatgctgtcagcttccaggaattggtg
aacggcaagagtgaggggaacaatctcggctgcctgcagaggatgctggatgatgtgata
ggagcctcctcagagctgagtctgtcctgtatcagcttatcagaagctgcctcgatctca
ggaagtgtcgatgacgtcttagaggacgacctgctctga
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