Scomber scombrus (Atlantic mackerel): 134003766
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Entry
134003766 CDS
T10651
Symbol
arhgap17a
Name
(RefSeq) rho GTPase-activating protein 17a isoform X1
KO
K20638
Rho GTPase-activating protein 17
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
134003766 (arhgap17a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
134003766 (arhgap17a)
Membrane trafficking [BR:
ssco04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
134003766 (arhgap17a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR
RhoGAP
BAR_3
BAR_2
DUF5790
Motif
Other DBs
NCBI-GeneID:
134003766
NCBI-ProteinID:
XP_062299081
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All DBs
Position
21:8996432..9026713
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AA seq
781 aa
AA seq
DB search
MKKQFNRMKQLANQTVGRAEKTEVLSDDLLQIERRMELVRVVSHNTHKRMVSCLQGHIGA
DAEKRHSVPRLYTGNGQKKLPLTALSQAMVEGGNQLGEDSLIGKMMEVCGEAENRLASEL
MQHELQIEKDVLDPLSQLAEVDIPNILKQRKQLAKLVLDYDSARARWLQATKSIISGTNT
QALTAKADLLKEEMDEAMNKVELCKDQLAADMYSFFSKEGEYARYFVTLLEAQADYHRKS
LTLLEGVLPTIQTQQDSWTEKPAFGTALEEHLKRSGREIALPLEACIMMLLETGMKEEGL
FRIAAGASKLKKLKAALDCSTSQLEEFYSDPHAVAGALKSYLRELPEPLMTHQLYDEWNQ
ASSVSDPDTRLQALWVVCDKLPKNNKNNLRYLVKFLAKLAQESEVNKMTPSNIAIVLGPN
LLWAKTEGSLAEMAAATSVHVVAIIEPIIQHADWFFPEDVEFNVSGMFAMPTPASNHNNH
LDYDCSTIERKRPGSMVGPENDTSRKDNNPKLRDSTPAQTPLLQRNGSGGGGGQAAGQLG
TGTPGAGPMGPSPHMMRRGTKKQAPAPPKPSNPPPSQPCNSVNHTSSSGSSQCFSPTPRP
LSSHSPTSPTSPNLQPCTTPRRHSSNQPPIHAPSHPPPEPPTQASPLPQQAYPGGDQQSA
DTSPPDTPTPPDTPPPSANTHDGPGAVAPPSPAPYQTGSLPRPRPVPKPRNRPNVPPPPQ
PTTLTGDTNGICATTYKMMDPAMSFKGLSRALVPEFAVDQQPASSLPPLRDCDLDTESTV
L
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagcagttcaatcggatgaaacagctcgccaatcaaacagttggcagagcggag
aaaacagaagttctcagcgatgacctcctgcagattgaacggcgcatggagctggtgcgg
gtggtgtcccacaacacacacaagaggatggtctcttgtctacagggacacatcggcgca
gatgcagagaagagacattccgtaccacgcctctatacaggaaatggtcagaaaaagctt
cctctgacggcgctatcgcaggctatggtggagggaggaaaccagttgggagaagactcc
ttaatagggaagatgatggaagtgtgcggcgaggcggagaatcggctggcatcggagctg
atgcaacacgagcttcagatagagaaggacgttctggatcccctcagccagctagcagag
gtggacatccccaacatcctgaagcagaggaaacagctggccaaactggtgctggattac
gattctgccagagcaagatggttgcaggcaaccaagtcaataatctcaggaacaaacact
caagcactgacggccaaagctgacctactgaaggaggagatggatgaagcaatgaacaaa
gtggagctttgcaaggaccagcttgctgcagacatgtacagtttcttctcaaaagaagga
gagtacgcccgctactttgtaacgctcctagaagctcaggctgattaccacagaaagtct
ctcactctcctggagggtgtcttgccaaccatccagactcagcaagactcgtggacggag
aagccggcgtttggcacggcgctggaagaacacctgaaaaggagtggaagggagatcgct
ctgcccttagaggcctgcattatgatgcttctagagacgggcatgaaggaagagggtctg
ttcagaatcgcagcaggagcatccaaactaaagaagctgaaggcggcgctggactgttcc
acgtcacaactggaggagttttattccgacccccacgctgttgctggagcactgaagtcg
tacctgagagaactccccgaacccctaatgacccaccagctttatgacgagtggaaccag
gcatccagcgtgtcggaccctgacacgaggctccaggcgctctgggtcgtgtgtgataag
ctaccaaagaataacaaaaacaacctgaggtatctggtgaagtttttagccaagctggct
caggagagcgaggtgaacaaaatgactcctagcaacatcgccatcgtcctgggacccaac
ctgctctgggccaagactgaggggagtctggccgagatggctgcagctacctctgtgcac
gtggtggccatcatagagcccatcatccagcacgccgactggttctttcctgaggatgtg
gagttcaatgtgtccggcatgtttgcgatgcccacgcccgcatccaaccacaacaatcac
ctggattatgactgcagcaccatcgagaggaagcggcctggcagtatggtgggaccagag
aacgacacatcacgcaaagacaacaacccaaagctacgtgactccacacctgcccagacc
cctctgctccagaggaatggctctggaggaggagggggccaggctgcagggcagctgggc
actgggacccccggggctggacccatggggccaagtccgcatatgatgcgcagaggtacc
aagaagcaggctccggcccctcccaaaccctcaaaccctcctcccagccagccctgcaat
tcagtgaaccacacctcctcctcaggctcatcccagtgcttcagccccactcccagacct
ctgtccagccactcgcccacctctcccacctcccccaacttacagccatgcaccacaccc
aggcgccactccagcaaccagcccccaatccacgcgcccagccaccctcctccggagcct
cctacacaggccagccctctccctcagcaggcgtatcccggcggggaccagcagagcgcg
gacacctcacccccggacaccccgacacctccggacacccctccgccctccgccaacacc
cacgacggccccggggccgtcgctcctccgtccccggctccctaccagacaggctctctt
ccccggccgcgacccgtccccaaacccaggaacagacccaacgtcccaccaccaccacag
cccaccacactgacgggtgacaccaacgggatctgtgccactacttataagatgatggac
ccggcaatgtctttcaaagggctgagtcgagctttggtccctgagttcgctgtagaccag
cagccagcctcctccctgcctcctctcagagactgtgacctggacactgaaagcaccgtc
ctataa
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