Scomber scombrus (Atlantic mackerel): 134003859
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Entry
134003859 CDS
T10651
Symbol
mybpc2b
Name
(RefSeq) myosin binding protein Cb
KO
K12558
myosin-binding protein C, fast-type
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134003859 (mybpc2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
134003859 (mybpc2b)
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
134003859 (mybpc2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
THB
FN3_DSCAM-DSCAML_C
V-set
Fn3_Dep-1_3rd
C1-set
Motif
Other DBs
NCBI-GeneID:
134003859
NCBI-ProteinID:
XP_062299195
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All DBs
Position
21:complement(11691015..>11701177)
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AA seq
1109 aa
AA seq
DB search
TSTLTSFSYLSETVSTELTGLFVEKPPESTVAVTGSDIHFVAKVDTTKLARKPTMKWLKG
KWLDLGSKAGKHMQFKETFDRNTKIYTYEMKIIKVVPGDAGGYRCEVTSKDKCDSSNFEI
SVEAAHQEEQADILSAFKRADAGEDEGDLDFSALLKATKKKKKAQKAPEQVDVWELLKSA
HPCDYEKIAFEYGITDLRGMLKRLKKMKTVEPKHTEAFLKKLDSCYSVDKGKKIVLTCEV
VDPMVQVKWLKNGQEIKPSAKYIIEANGNLRTLTINKTNLSDDAAYECVVGDDKSFTEVF
VKEPPVTITKLMDDYHVVVGERVEFEIEVSEEGAHVMWFFEDIELHRDKDSTKYRFKKDG
KKHTLIIQEATEADIGMYHAWTNGGHTKGELEVEEKELEVLQDIADLTVKATDSALFKCE
VSDDKVTGKWFKDGVEVLPSDRIKMTHIGRFHRLIIDEVKPDDAGDYTFVPDGYALSLSA
KLNFLEIKIDYVPRQDPPKIHLDATGSMVSQNTIIVVAGNKLRLDVEITGEPAPTVVWSK
GDHEITETEGRVRVETKKDLSCFIIEGAEREDEGKYNIVVTNPAGEDKAILFVKIVDVPD
PPESVKCTGVGEDCATITWQPPKFDGGAVVKGYLMERKKKGSSRWTKLNFDVYESTTYEA
KRMIEGVLYEMRVFAVNSIGLSQPSLNSKPFMPIAPTSEPTRLTVSDVTDSTCSLKWLAP
EKIGAGGLDGYIIEYCKDGDTEWVVANKDPCERQGYVVRGLPVGEKIHFRVVAINIAGRS
PPATMAQPVTIREIVEYPKIRLPRDLRTKYTKKVGEKINLTIPFQGKPRPVATWYKDGEP
IDPKMVNVRNSNVDSIFFIRSAERTHSGKYELVVQIENMEDRAAIDIRIVERPGPPRNVK
VTDIWGFNAALEWEVPKDDGNCEIIGYTIQKADLKTKEWFTVYEHNRRTHCTCSDLIMGN
EYMFRVYSENLCGLSDDNCPSKNTAAIEKTGLEFKPTPFKEKDMTCMPKFTRPLVDRSVV
AGYSTAISCAVRGFPKPKIIWMKNKMILGEDPKFLMQNNQGVLTLNIRKPSTFDGGKYSC
RAINDLGQDEVECRLDVRIPKDPDKEDKK
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
actagtacgctaacttctttctcctacctttcagagactgtgtccaccgagctcactggg
ctctttgtggagaaaccaccagagagtacagtcgctgtcacaggatcggatatccatttc
gtagccaaggttgacacaaccaagctggccaggaaacccaccatgaaatggctgaaggga
aagtggctggaccttggcagcaaggctgggaaacacatgcagttcaaagaaacatttgac
aggaatactaagatctacacttatgaaatgaagatcatcaaagtagtccctggagatgct
ggaggctacaggtgcgaagtgacttcaaaagacaagtgtgacagctccaacttcgagatc
tctgttgaagctgcacaccaagaggagcaggcagatattttgtctgctttcaagagagcg
gatgctggagaggacgagggagatctggatttcagcgctctgctgaaagccactaagaag
aagaagaaggctcaaaaagcgcccgagcaggtagacgtatgggaattgcttaagagcgcc
catccatgcgactatgagaaaatcgcctttgagtatggcatcactgacctgaggggcatg
ctgaaacgtctgaaaaagatgaagactgttgagcccaagcataccgaggctttcctgaag
aagctagattcttgctactcagtggataaaggcaagaagattgttctgacgtgtgaggtg
gttgatcccatggtccaggtcaaatggttgaagaacggccaggagatcaaaccctcagcc
aagtatatcattgaggcaaatgggaatttgagaacacttaccatcaataagacaaacctg
tccgatgatgctgcatatgagtgtgtggttggcgatgacaagagtttcacagaggtgttc
gtcaaagagccccctgtgaccatcaccaagctgatggacgactatcatgtggttgttgga
gagagagtggagtttgagatcgaggtctcggaggagggtgcccatgtcatgtggttcttt
gaagacatagagcttcacagagacaaagactccacaaagtatcgcttcaagaaggatgga
aagaagcacacactgatcatccaggaggccacggaggctgatattggaatgtaccatgcg
tggacaaacggggggcacaccaaaggagaactggaagtggaagaaaaagaactggaggtg
ctgcaggacattgctgatctcacggtcaaggcaactgatagtgccttgttcaagtgcgag
gtgtctgatgacaaggttacaggaaagtggttcaaagatggagtggaggtcttgccaagc
gaccgtatcaaaatgacccacattggaaggtttcatcgactgattattgatgaggtgaag
ccagacgatgctggcgactacacatttgttcctgatggatacgctctgtccctttctgcc
aaactcaacttcttggaaattaagatcgactatgtgcccagacaagatcctccaaagatc
cacctggacgccactggaagcatggtctcccaaaacaccatcattgtggtggcaggcaac
aagctccgactggatgtggaaatcacaggcgagccagcacctacagttgtttggtccaaa
ggagatcatgagatcacagagactgaagggcgtgtaagagtggagaccaagaaggacttg
agttgcttcatcatagagggagcagagagggaggatgagggcaaatacaacatcgttgtg
accaaccctgctggagaggataaggctatactttttgtgaagattgtggatgtgcccgac
cctcctgagtctgtcaaatgcacaggagtgggagaggactgtgctactatcacctggcag
cctcctaaatttgatggtggtgcagtagtgaaaggttatctcatggagagaaagaagaaa
ggctcttccaggtggacaaagcttaactttgatgtatatgaatcaactacatatgaggct
aagaggatgattgaaggtgttctgtatgagatgagggtgtttgctgtcaacagtattggc
ctgtctcagccaagtctcaactccaaacccttcatgcctattgccccaactagcgagccg
acacgtctgactgtaagcgatgtgacagacagcacatgcagcctgaagtggctcgcccca
gagaagataggagccgggggcctggatggctacattattgaatactgcaaggatggagac
actgagtgggtggtagcaaacaaggacccttgtgagaggcaggggtatgtggtgcgtggc
cttcccgtgggagagaagatacacttcagggtggtggccataaacatcgctggacgtagc
cctcctgcaacaatggcacagcccgtcaccatccgtgagatcgtggaatatcccaagatc
cgccttcctcgtgacctgagaacaaagtacaccaagaaagtaggagaaaagatcaacctg
accatacccttccagggtaaaccacgccccgttgcaacctggtacaaggatggtgaaccc
attgaccccaagatggtcaatgtccgtaacagcaacgtggacagtatcttctttatccgc
tctgcagagagaacgcactcaggaaaatatgagctggttgtacagattgagaacatggag
gacagagctgccattgatatcaggattgttgaaaggccagggcctcctaggaacgtgaag
gtgacagacatctggggcttcaatgcagcactggagtgggaggtccccaaggatgatggc
aactgtgagattattggatacaccatccagaaggcagacttgaagaccaaggaatggttc
accgtttatgagcacaacaggcggactcactgtacatgttcagatctaatcatgggcaat
gagtacatgttccgcgtctacagtgaaaacctttgcggcctgagcgatgacaattgcccc
agcaagaacacggctgccattgaaaagacaggcctggagttcaaaccaacccccttcaag
gagaaagacatgacctgtatgcccaagtttacacggcccctggttgatagatctgtggtg
gccggttacagcactgccatcagctgtgccgtcagaggcttccccaagcctaagatcatc
tggatgaagaacaagatgatccttggtgaggatcccaagttcttaatgcaaaacaaccag
ggagtgctgaccctcaacattcgcaagccaagcacctttgatggaggcaaatactcctgc
agggctatcaacgacctgggccaggacgaagtggaatgcaggctggacgtccgaattccc
aaagacccagacaaggaagataagaaatga
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integrated database retrieval system
