Scomber scombrus (Atlantic mackerel): 134003901
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Entry
134003901 CDS
T10651
Symbol
pgap3
Name
(RefSeq) post-GPI attachment to proteins factor 3
KO
K23553
post-GPI attachment to proteins factor 3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
ssco01100
Metabolic pathways
Module
ssco_M00983
GPI-anchor remodeling
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
134003901 (pgap3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
134003901 (pgap3)
Membrane trafficking [BR:
ssco04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Post-GPI attachment to proteins factors (PGAP)
134003901 (pgap3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Per1
Motif
Other DBs
NCBI-GeneID:
134003901
NCBI-ProteinID:
XP_062299244
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Position
21:12681137..12686965
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AA seq
331 aa
AA seq
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MASPLPRCTAVRLPALAVAVLLLVSVSTVQSSQGDKEPVYRDCVKQCVRTNCTGARLRGF
QSAQPQYMMLTGWTCRDDCRYQCMWTTVGLYQAEGYSVPQFHGKWPFARFLCFEEPASAL
ASLLNGLACLLMLMRYRSTVPRQSPMYHTINAFSLVSLNAWFWSTVFHTRDTYLTEKMDY
FCATAVILYSIYLCCVRTLGLRRPGVSSMVGVLLILAFTSHVSYLTFVSFDYGYNMAANA
TIGMVNLLWWLCWCWQNRRTLPYWWKCGLVVLLLHGLALLELLDFPPMLWVLDAHAVWHL
STIPVHFLFYSFLIDDSLYLLNTEKMGVKVE
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaccgttaccccgctgcacagctgtcagactccccgctctggccgtcgccgtc
ctgctgctggtgtcggtgtctactgtgcagtcctctcaaggcgacaaggaaccagtctac
agagactgtgtgaagcaatgtgtccgtaccaactgcaccggagcccggctacggggcttt
cagtccgcccagccgcagtacatgatgctgacaggctggacatgtcgtgacgactgtcgc
tatcagtgcatgtggaccacagtgggcctttaccaggccgaggggtacagcgtcccacag
ttccacggcaagtggccatttgcacgcttcctgtgttttgaggagccggcatcagccctg
gcctctctgcttaatggcctggcttgccttctcatgctgatgcgatatcggagcacagtt
ccgcgccagagccccatgtaccacaccatcaacgccttctctctggtatcgcttaacgcc
tggttctggtccacagtgtttcacacccgggacacctatctcactgagaaaatggactat
ttctgtgcaacagccgtgattctttactccatctatctgtgctgtgtcagaactttgggt
ctgaggcgtccgggggtgtcaagcatggtgggagtcttgctcatcttggcctttacctca
catgtgtcctacttgacctttgtcagtttcgactacggctacaacatggctgctaacgcc
accattggcatggtgaaccttctgtggtggctgtgttggtgctggcagaaccggaggacc
ctgccctactggtggaagtgtggcctggtggtgctgctgcttcacggtttagccctgctg
gagctgctggacttccctccaatgctctgggtcttggacgctcacgccgtatggcacctg
agcaccatccctgtgcacttccttttctacagtttcctgatagacgacagcctctacttg
ctaaacacagagaagatgggcgtcaaagttgagtag
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