Scomber scombrus (Atlantic mackerel): 134003921
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Entry
134003921 CDS
T10651
Name
(RefSeq) protoheme IX farnesyltransferase, mitochondrial
KO
K02257
heme o synthase [EC:
2.5.1.141
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00190
Oxidative phosphorylation
ssco00860
Porphyrin metabolism
ssco01100
Metabolic pathways
ssco01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
134003921
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
134003921
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ssco01006
]
134003921
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ssco03029
]
134003921
Enzymes [BR:
ssco01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.141 heme o synthase
134003921
Prenyltransferases [BR:
ssco01006
]
Compound prenylation
Protoheme farnesyltransferase
134003921
Mitochondrial biogenesis [BR:
ssco03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
134003921
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UbiA
Motif
Other DBs
NCBI-GeneID:
134003921
NCBI-ProteinID:
XP_062299260
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Position
21:18955810..18989489
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AA seq
476 aa
AA seq
DB search
MYKTPCSRLSGLLGVSVKQKLAQNIPRCNQTTRSLIQLHRRDPSNWLTYQHLNFLKRQYV
AKSNSELHQRAIPKQAPVLTIVDERDDSVERQVQRVPAIDPVLTDADPQLEDATSKAQPE
ISTLKAATEDAALTKTSMSSTVGNVDETPHVHVETEKAREARLDRQWKQLKLNLGDLPDI
YARLAKIKLTALVVTTAAAGYAMAPVPFDPVTFFVACLGTGLASCTANSINQYFEVPFDS
NMNRTKNRPLVLGQISPLHAVSFALACGVPGVALLTLAANPLTGFLGALNIFLYTSCYTP
LKRLSITNTWVGAVVGAIPPVMGWTAATGCLDPGALLLGGFLYSWQFPHFNALSWNLRED
YSRGGYRMMSVTHPGMCKRVALRHSLGLIGLSTLAPVLDVTTWTFPIISLPINLYISYLA
FRFYRKGDRNSARKLFFCSLWHLPMLLLLALTCKKPRKDQKDTALTPASAPLTLPS
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaacgccatgtagcagactgtcaggcttgcttggtgtcagtgtgaaacagaag
ttggcacaaaatattcctcgatgtaaccaaaccactcgcagccttattcagctgcacaga
agagatccatcaaactggctgacgtaccagcacctcaacttcctgaaacgtcagtatgtt
gcaaagagcaacagtgagcttcaccaacgagccatccccaaacaggctccagtgctcaca
attgtggacgagagagatgacagcgttgaaaggcaggtccagagagtaccagctatcgat
cctgtgctcacagacgctgatccacagctagaggatgccaccagtaaggcacagcctgaa
atatccaccttgaaggccgccacagaagatgcagcgttaacaaaaacgtccatgtccagt
acggttgggaatgtagacgagactccacatgtccacgtggagacggagaaggcgagggag
gcacgtttggatagacagtggaaacagctgaagcttaatctgggcgacctgccggatatt
tacgccagactcgccaaaatcaaactcacagcactggtggttacgactgcagcagctggc
tatgcaatggctccagttccctttgaccctgtcaccttcttcgtggcttgtctgggaacg
ggccttgcctcgtgtactgccaactcaatcaaccagtactttgaggtgccttttgactcc
aacatgaaccgcacaaagaaccgtccactggtccttggacagatcagtccccttcatgcc
gtgtcctttgctctggcctgtggagttcctggagtcgcgctgctcacactggccgcaaac
cccttgacgggcttcctgggcgccctcaacatctttctctacacgagttgctacacaccg
ctcaagaggctcagcatcaccaacacctgggtgggagcagtggtgggtgccatacctccc
gtcatgggctggacagctgccacaggttgtctggacccaggtgctttattgctgggtggt
ttcctgtacagctggcagttcccccacttcaacgccctgagctggaacttgagggaagac
tactcccgcggcggctaccgcatgatgtccgtcacccaccccggcatgtgcaagcgcgtg
gccttgcgtcacagcctgggtctgatcggcctgtcgaccttagcacccgtgttggacgtc
accacctggaccttccccatcatctccttacccatcaacctgtacatcagctacctggcc
ttccgcttctaccgcaaaggagatcgcaacagcgcccgcaagctgttcttctgcagcctc
tggcacctgcccatgctactgctgctggcgctcacttgtaagaaacctcgcaaagatcag
aaggacacagctctgactccagcatctgcaccactcacactgccaagctaa
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