Scomber scombrus (Atlantic mackerel): 134004167
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Entry
134004167 CDS
T10651
Symbol
psmc2
Name
(RefSeq) 26S proteasome regulatory subunit 7
KO
K03061
26S proteasome regulatory subunit T1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
134004167 (psmc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ssco03051
]
134004167 (psmc2)
Proteasome [BR:
ssco03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
134004167 (psmc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
OB_PRS7
AAA_lid_3
AAA_22
AAA_2
AAA_5
AAA_16
DUF815
nSTAND3
AAA_14
RuvB_N
AAA_28
AAA_7
Prot_ATP_ID_OB_C
AAA_33
TIP49
AAA_18
RNA_helicase
Mg_chelatase
Sigma54_activ_2
IstB_IS21
AAA_24
Motif
Other DBs
NCBI-GeneID:
134004167
NCBI-ProteinID:
XP_062299321
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Position
22:complement(4642948..4647408)
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AA seq
433 aa
AA seq
DB search
MPDYLGDDQRKTKEEEKDDGPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKIN
ELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK
FVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGC
KEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRV
IGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTML
ELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHAR
SMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSY
AKFSATPRYMTYN
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgccggattatttaggagacgaccaaagaaagacaaaggaggaggaaaaagatgacgga
cctatcagagctttggatgaaggagacatcgctctgctgaaaacttatggtcagagcacc
tactccagacagatcaaacaggtcgaagatgacatccagcagctgctcaagaagatcaat
gagctgacaggcattaaggagtcagacactggcctggccccaccagctctctgggatctg
gctgctgacaaacagactctgcagagtgaacagcctctgcaggtggcaagatgcacaaag
atcatcaatgcagactcagaggaccccaaatacatcatcaacgtcaaacagttcgccaag
ttcgtggtggacctgagcgaccaggtggcccccactgacatcgaggagggcatgagagtc
ggcgtggacagaaacaagtaccagatccacattcctctgcctcccaaaattgatccaact
gtcaccatgatgcaggtggaggagaagcctgatgtgacctacagtgatgtcggtggatgt
aaagagcagattgagaagctgagagaagtggtggagacccctctgctccatcccgagagg
ttcgtcaatctgggtatcgagccaccgaaaggcgtgctgctgttcgggccacccggcacc
ggaaagactctgtgcgcccgagccgtagccaaccgcacagatgcctgcttcatcagagtc
atcggatctgagctggtgcagaaatacgtgggagagggagccaggatggtgcgtgagctg
tttgagatggccaggactaagaaggcctgtctcatcttctttgatgaaattgacgccatc
ggaggcgctcgtttcgatgatggcgctggcggagacaatgaggtccagagaaccatgttg
gagctcatcaaccagctggacggcttcgaccctcgaggcaacatcaaagtgctgatggcc
accaacagaccagacacactggacccggccctgatgagacccgggcgtctggacaggaag
atcgagttcagcctgcccgatctggagggtcgcacacacatcttcaagatccacgcccgc
tctatgagtgtggagagagacattcgcttcgagctgctggctcgtctttgtcccaacagc
accggtgccgagatccgcagcgtgtgcacggaggcgggcatgttcgccatcagagctcgc
aggaagatcgccacagagaaagacttcctggaggctgtcaacaaggtcatcaagtcctac
gccaagttcagcgccacccccagatacatgacctacaactaa
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