Scomber scombrus (Atlantic mackerel): 134004172
Help
Entry
134004172 CDS
T10651
Symbol
atxn7l1
Name
(RefSeq) ataxin-7-like protein 1 isoform X1
KO
K11318
ataxin-7
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssco03021
]
134004172 (atxn7l1)
03036 Chromosome and associated proteins [BR:
ssco03036
]
134004172 (atxn7l1)
Transcription machinery [BR:
ssco03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
134004172 (atxn7l1)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
134004172 (atxn7l1)
SAGA complex
134004172 (atxn7l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SCA7
DUF2462
Motif
Other DBs
NCBI-GeneID:
134004172
NCBI-ProteinID:
XP_062299327
LinkDB
All DBs
Position
22:11487573..11520606
Genome browser
AA seq
729 aa
AA seq
DB search
MHSKNQKRHGSPVPSRSPLVPMKPKTPAVAPAVAPSPGDTLAFRVPKDYPHSRFSKAPLA
VYPPKGARNKTCVSLPVVSLEKMPCLSQADSASHIRLTSSSSSSSSSPSPSTSPIKHPSL
TPPGSQRSSEKLMNGRGTSGPSTPRSTASPSSLDGRPSLARSPLDRRPSSTPSPSPLDRK
PSPSPSPSQRSGTLPSSSSSSSSPLEKKQQNGTKASSRSHRRLSGRVFDPNKHCGVQDPE
TKRPCTRSLTCKTHSLAHRRAVPGRRTHFDILLAEHKGRAKEKEGPKEKDREGVQGGKEG
CSQSITSQETVSPSKPHCPNGRPLSSLKLRLANAHIPRVPGSTTSTSSPLPPAPAPTTAP
TPAPNPEPSPHSWVTAAGEGGRLSSDEGDAETAEDTDRPGFHYSSHHPQPLGFCVFSSRL
MGRGHYVFDRRWDRMRLALQSMVEKHLNAQMWRKVPLAAESLFSLPSSGTSSFTSQQAHP
PSPTSITSPVLTSPSSTFSYTANFPQSASKAGVFSVRDAQQPLAPATAPGKARNGTHKAS
RPSKEIEDSVVGSKKKKNPSSSSTSFSFSSSLFPTVDNHKRNGSSYHPTLQGAGGTAATP
ARKKGLGRGGSGRGGSRLWSSGEDWLSRADGSQSHNSQNSRDLGTASISHSPNKELASNP
HQPLAPPSGPLAYGGKAEGRKRRSPSSYRGKASKLSRPGGLKSLFGKGNDSGGILASTPE
SQRQAKLHH
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgcatagcaagaaccagaagcgccacggctcccctgtcccctctaggagccctctggtg
cccatgaagcccaagacacccgcagtggcccctgctgtggctcccagtcctggggacaca
ctagccttcagggtccctaaagactacccccactcccggttcagcaaggcaccacttgct
gtctatccaccaaagggggcgcggaacaagacatgcgtatcacttccagtcgtaagcctg
gagaagatgccctgcctcagccaagcggattccgcatcacacatccgcctcacctcctcc
tcctcctcctcctcctcctccccctccccttctacctcccccatcaaacacccatccctc
actcccccgggctcccagcgctccagcgaaaagctaatgaatggtcgaggcaccagcggg
ccgtccacaccgcgctccaccgcgtctccatcctcactggacgggcggcccagtctggcg
cgttctccgctggacagacggccgtcgtctacaccttctccctccccgctggaccggaaa
ccctccccgtcgccttcgccctctcagcggtctggaactctgccgtcatcatcgtcatcg
tcgtcgtcgcctttggagaagaagcagcaaaatggaactaaagcttcctccaggtcgcac
agaagactctcagggagagtgtttgatcctaacaagcactgtggagtccaggacccagag
acgaaacgaccatgcacgcggtctctcacctgcaagactcactccttagcccaccgccga
gccgtccccggtagaaggacacatttcgacatcctcctggccgaacacaaggggagggcg
aaggagaaagagggaccgaaggagaaagacagggaaggagtgcagggagggaaagaaggc
tgcagccagagcatcacgtcacaggagaccgtgtctcccagcaagcctcactgccccaac
ggtcgacccctgtcctcactgaagttacggcttgctaatgcgcacatacccagggttcca
ggctccaccacctccacctccagtcctctgcctccagcaccagcgcctaccacagcccca
accccagccccaaacccagaaccgtctccccacagctgggtaacggcagcgggagaaggt
ggtcggctttcgagtgacgagggagacgcagagactgcagaggacacagacagacctggc
tttcactactccagtcaccacccacagcctttagggttttgtgtattcagcagcaggctc
atgggacggggccactatgtgttcgacaggcggtgggacaggatgaggctggcgctgcag
agcatggtggagaaacacctcaatgcacagatgtggaggaaggtgccactggctgctgag
agcctcttttccctcccctcctctggtacctcctccttcacttcacaacaagcccaccct
ccctctcccacctccatcacttctcctgtcctcacctccccctccagcaccttctcctac
accgctaactttcctcagtctgcatccaaggccggagtgttcagcgtccgagatgcccag
caacccctcgccccggctaccgcaccaggaaaagctcgtaacggcacgcataaagccagc
cgaccatccaaagagatagaagactctgtagtgggctctaagaagaagaaaaacccttcc
tcctcctccacctccttttcgttttcttcctccttgtttccgactgtggataatcacaaa
aggaatggcagcagctatcatccaacattacaaggcgcgggggggacagctgccactcca
gccaggaaaaagggacttgggcgtgggggaagcgggcgcgggggaagcaggctttggagc
agtggcgaggactggttatctagagctgacggttctcaaagccacaactcgcagaacagc
cgcgatcttggcaccgccagtatatcccactcacccaacaaagagctggcttccaatccc
catcagccactggctcccccctccggacccctggcatatggaggaaaagcagaggggagg
aagaggaggagccccagctcttacagaggcaaggccagcaagctgagcaggccaggcggg
ctgaagagcctcttcgggaaagggaatgacagcggggggatactggcctccacgcctgag
tctcagagacaggccaagttgcatcactga
DBGET
integrated database retrieval system
