Scomber scombrus (Atlantic mackerel): 134004206
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Entry
134004206 CDS
T10651
Symbol
mkrn1
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
134004206 (mkrn1)
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134004206 (mkrn1)
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134004206 (mkrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
Torus
zf_CCCH_4
zf-CCCH
zf-CCCH_2
zf-CCCH_DUS3L
zf-CCCH_3
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-CCCH_PARP12
zf-RING_5
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
134004206
NCBI-ProteinID:
XP_062299382
LinkDB
All DBs
Position
22:complement(931593..946968)
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AA seq
431 aa
AA seq
DB search
MAEAAAASTAASSVTGGWTKHVTCRYFMHGLCKEGDNCRYSHDLTNSQPAAMICKFFQKG
NCVFGDRCRYEHCKPAKQEELPTTETLPLPSASLAAQSDPEPSGPTPGPGAQDWVNAAEF
VPGQPYCGRAEPVQAESSAPLIEELDSDTTKDKKELRKQLCPYAAVGECRYGLNCAYLHG
DVCDMCGLQVLHPTDNNQRSEHTKACIEAHEKDMEISFAIQRSKDMMCGVCMEVVFEKVN
PSERRFGILSNCSHCYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVEDKDD
KQKLIQKYKDGMGSKPCRYFDEGRGTCPFGSNCFYKHAFPDGRLEEAQPQRRQTGSNSRS
RNSRRTPLWDIFDERESTDSFDNEDEEMVTFELSEMLLMLLAAGTDDEVTDSEDEWDLFH
EELDDFYEIYL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagctgcagcgtctacagcggcttcgtcagtaacgggaggttggaccaaa
cacgtaacctgcagatatttcatgcatggtctttgcaaagaaggagacaactgtcgatat
tcccatgatctgaccaacagccaacctgcagccatgatttgcaagttctttcagaagggg
aattgtgtgtttggggaccgttgcaggtatgaacactgtaaaccagcaaagcaggaggag
ctgccaacaaccgagacgctgccgctgccctccgcctcgctggccgcccagtcagaccca
gaacccagtgggccaacaccaggtccaggggcacaagactgggtcaatgccgctgagttt
gtcccaggacagccgtactgtggacgggctgagccggtgcaggcggagagctctgctcct
ctcattgaggagttggacagtgacacaactaaggacaagaaagagttgaggaagcagctt
tgtccgtacgctgccgtcggagagtgccggtacggtctcaactgtgcctatctccatggc
gacgtgtgtgacatgtgcggactgcaggtactccaccccactgacaacaaccagcgctca
gaacacacgaaggcatgcatcgaagctcatgagaaggacatggagatttcattcgccatc
caacgcagcaaggacatgatgtgcggtgtgtgtatggaggtggtgtttgagaaggtcaac
ccaagcgaacgccgatttggcattctctccaactgcagccactgctactgtctaaagtgc
atccgcaagtggaggagtgccaaacagtttgagagcaaaatcatcaagtcttgcccagag
tgtcgaatcacatccaactttgtcatcccaagcgagtactgggttgaagataaggacgac
aagcagaaactcatccagaaatacaaggacggcatggggagtaaaccgtgtcgatacttt
gacgagggtcgtggaacgtgcccttttggctcaaattgcttctataagcacgcttttcct
gacgggcgattggaggaagctcagccacagagaaggcagactggatccaacagcaggagc
aggaactcgaggcgaacaccgctgtgggacatcttcgacgagcgagaaagcaccgactcc
ttcgacaacgaggacgaggagatggtgacgtttgagctgagcgagatgctcctcatgctg
ctggccgcggggaccgacgacgaggtaacggattcagaggacgaatgggacttgtttcac
gaggagctggacgatttttatgagatttacctatag
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