Scomber scombrus (Atlantic mackerel): 134004228
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Entry
134004228 CDS
T10651
Symbol
snrpf
Name
(RefSeq) small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
ssco
Scomber scombrus (Atlantic mackerel)
Pathway
ssco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134004228 (snrpf)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssco03019
]
134004228 (snrpf)
03041 Spliceosome [BR:
ssco03041
]
134004228 (snrpf)
03032 DNA replication proteins [BR:
ssco03032
]
134004228 (snrpf)
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
134004228 (snrpf)
Spliceosome [BR:
ssco03041
]
Complex A
U1 snRNP components
Sm proteins
134004228 (snrpf)
U2 snRNP components
134004228 (snrpf)
Complex B
U1 snRNP components
134004228 (snrpf)
U4/U6.U5 tri-snRNP components
134004228 (snrpf)
Complex C
U2 snRNP components
134004228 (snrpf)
DNA replication proteins [BR:
ssco03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
134004228 (snrpf)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
134004228
NCBI-ProteinID:
XP_062299412
LinkDB
All DBs
Position
22:13884457..13887647
Genome browser
AA seq
86 aa
AA seq
DB search
MSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYVDGALAGHLG
EVLVRCNNVLYIRGVEEEEEDGEMRE
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaccgttgaacccaaagccattcctgaacggcctgacaggcaaacccgtgatg
gtgaaactgaagtggggtatggagtacaagggctacctggtgtcagtggatggatacatg
aatatgcagctggcaaacacagaagaatacgtggatggagcattggcgggtcaccttggt
gaggtgcttgtcaggtgcaataacgttttgtacatcagaggagtagaagaagaggaagag
gacggagaaatgagagagtga
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