Scomber scombrus (Atlantic mackerel): 134004235
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Entry
134004235 CDS
T10651
Symbol
ptprb
Name
(RefSeq) receptor-type tyrosine-protein phosphatase beta isoform X1
KO
K05694
receptor-type tyrosine-protein phosphatase beta [EC:
3.1.3.48
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
134004235 (ptprb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssco01009
]
134004235 (ptprb)
Enzymes [BR:
ssco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
134004235 (ptprb)
Protein phosphatases and associated proteins [BR:
ssco01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
134004235 (ptprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Y_phosphatase
Fn3_Dep-1_4th
PTP_tm
FN3_Tor_3rd
Pur_ac_phosph_N
Tc-R-P
Glyco_hydro_66
PTP-SAK
bMG1
PTP-NADK
PTPlike_phytase
DSPc
Y_phosphatase3
TcfC
Motif
Other DBs
NCBI-GeneID:
134004235
NCBI-ProteinID:
XP_062299422
LinkDB
All DBs
Position
22:complement(22659931..22708641)
Genome browser
AA seq
2050 aa
AA seq
DB search
MLKCKVHNSLRWLLFTSLLLLLQDLSSAAPTEDQLVPCSISVSEPWSGLDSISLTVSTAG
RDCSFNLTSVDAATDSAECRRRSRGDEDIDTNEIGGKEQGKEKQEEVVEENYLGTNQLGG
EDGGSKDGGSKDVGGDFFTCVLDHLEPGTAYQLQLHSQSDGETANLTLHTRPSAPSGLAV
TSRTCSSLGLSWQAGPGRTQRFRLQLWERPHSPDQSGLLMNETLESTATQHTLNHLTPGR
MYNVTMVTEAGGLQNSRTIEAQTVPATVSNLTADYNNSTSLRLSWQQPEGDLDALVVTLS
SNDSRRRGRTTLPPNATQVTVDQLTPGSAYQVAVMSQSGELTKQSEITSRTAPEAASLLS
LSHSSSLGGLLLSWSSPAGNWESYRLLLFDGSQQLVSTTLDREAVNFSFPETSLTPGRLY
RAVLTVESGGLIAESSCEGSTAPAPVSDLHIRHSDETSLSAMWNHAPSGSRDSYFLTIRH
GNVTVDTREVEAHMRECTFNVLTPGRQYTITVTTRSGKLNTSVSLEGRTVPMALSSITLR
SSGVDSLQASWEKPAGDVDSYTLTLLQDSAVVQNYSVPAGSSSLLMDGLTPGALYRLQAA
TVSGGVQSQPTSLQGRTVPASASEVTVANGGRSDALQVSWRPAGGVVDSYQVRLQDGSRP
VHTLVVSHSSLPECSFSSLVAGHLYTVAIVTRSADMENTITVQARTQPATVQNPTAVHSA
RDGFLKVYWRHAAGDLDRYVVLIRYNHSVLQNKSVSAGYNECAFSSLTPGRLYTVTVETW
SGDYVSSVSTDGRTFPAAVGNLSLGNVGTGDLTVTWSPAPGDVDHYEVTLLFNDTRVYPP
VTLGSELRHHRLTSLTPGRLYKIVVSTFSGPNQRPQFIEGRTVPSAVRNLHLAPRKPLPG
LTDSVGGLVVSWTPGDGDLDMYIVSLSSTDGVVVENRLVPKHISSLEFLDLTPGHAYTIT
VQSQSGKLNNTKKVTGRTAPARVTALQADNDHTTHSLTVTWERPVGEFDGYSLQVLDEAG
VILANQSVAVESRSERLGGLMSGKWYRIRMVTLSGGVPSLEATAEGQTRPAAVSNLTVTV
SNTTSLSFSWRPSDGHVDIYHLSLYRVTEATANHRQDASGSRKDRHQAAGELESQQKVGP
AADGCVFSGLRAGSLYRLQVVSWSRSMNSDSSVLARTVPSPVSSLQVQSSGRRDRLTVSW
QHGEGRWSSYQVILYDVSGATLGAQMLGAEHNSHMFLGLVPGRRYRADVITHSGELTNNI
SAFGRTTPEPPTHLSVREGRVNDTIELSWAGPASGDYDSFSLQWTPLDQLSITQTRLTSR
IVGGMFPGRQYNFTVMTVSEAGAGPSVRSQPIQRSVRTSPAPLKSIHCFPVSSSSLSCSW
TAPLSDFDSYEVECRRHDDGKLTSALRLAGGVTAVTLDHLEAYRKYSVTVRASSAGQTSP
PATHTTVTMIDRPPVPPPAVRVSEKSSKVTPSSILFRFNCSWFSDANGAVRYFAVIVAES
DANELLQPEQRHPLPSYRDYINNSSVRAYQTAYFSSRCPQDSDTSAAQVVEVNLGAGGDR
LGGACDHYHDDDFYLSDSYGDFCDGPLKAKTSYRLSIRAFTKLFDENNKEFPQPLFTDTY
LSPPLRTHAEPLGGVVEGLSAGMFLIGMMVAVVSLLVYRQRLRKVNMAVQHGGLHGRGPT
SPIDTHGSFYGNENTTILNFRAVQENPVVRMNMWKEVPTSGIYMGVRSNRRVTSPIKICH
FESHLNKLQADSNYLLSEEFEDLKDVGRNQTMDVARLPENRGKNRYNNILPYDSIRVKLS
YLEDDPCSDYINASYIPGNNYRREYIATQGPLPGTKDDFWRMVWEHGVYNIVMVTQCVEK
GRVKCDQYWPADREPLYYGDLVIQMLSESVLPEWTIREFKITSESGCNYPRVLRHFHYTV
WPDHGVPESTQSLIQFVRTVRDYVDRSPGTGATVIHCSAGVGRTGTFIALDRVLQQMDSK
GTIDLYGSVFDQRLHRQHMVQTECQYSFLHQCVRDVLRARKHRSEQENPLYPIYENFNPE
YYRDFIYTGR
NT seq
6153 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaatgtaaagttcacaattctctccggtggctgttgttcacctcactgctgctg
cttctccaggatctgagcagcgcagctcccacagaggatcagctggtcccatgtagcatc
tctgtttctgaaccatggtccggtctggactccatatcgctgactgtgagcacggctgga
cgcgactgctccttcaacctgacgtctgtggatgctgcgacagacagcgctgaatgtagg
aggcgaagcagaggagatgaagacatagacactaatgagatcggaggaaaggagcaaggg
aaggagaagcaggaggaggtggtggaggagaactatctgggaaccaaccagctaggagga
gaggatggagggagcaaggatggagggagcaaggatgtaggaggcgacttcttcacctgc
gtgctggatcacctggagccaggaaccgcctaccagctgcagcttcattctcagagcgac
ggggagacggccaacctcaccctgcacacccgaccgtcagcgccgagcggcctggcggtg
acctccaggacctgcagcagcctgggtctttcctggcaggccggccccggcaggacgcag
cgcttcaggctgcagctgtgggaacgtcctcacagtccggatcaatcaggtttgctgatg
aacgagacgctggagagcacagcgacacaacacacgctcaaccacctgacgcctgggcgg
atgtacaacgttaccatggtgacggaggccggcggtctgcagaacagcaggacgatagag
gctcagacagtcccagcaaccgtttccaacctcaccgccgactacaacaacagcacaagc
ctgcggttgtcgtggcaacagcctgaaggtgacctggacgcgctcgtcgtcaccctctcg
tccaacgactcgaggcggcgggggaggacgacccttcccccgaacgccacccaagtcacg
gtagatcagctgactccaggctcggcctatcaggtcgctgtgatgtcacagagtggcgag
ctgaccaagcaatcagaaatcacctccaggacagctccggaggcagcgtctctcctctcc
ctctcccattcctcctccctcggtggtctcctcctctcttggtcgtcccccgctgggaac
tgggagagctacaggctgcttctgtttgacggctcccagcagttagtcagcaccactctg
gaccgagaggctgtgaactttagctttcctgagacgagtctaacgcctgggaggctttac
agagccgtgctgacagtagagagcggaggactgatagctgagagcagctgtgagggatca
acagctccggctccggtgtcggaccttcacattcgacactcagacgagacttcgctgagc
gccatgtggaaccacgctccctctgggtcacgtgacagctacttcctgacaattcgccat
ggtaacgtcaccgtggataccagggaggtggaggcccacatgagggagtgcacgttcaac
gttctcacacctgggagacagtacaccatcaccgtgacgaccaggagcgggaaactgaac
acctctgtgtcattggagggaaggacagtcccgatggcgttgagcagcatcactctgaga
agctccggggttgacagtctgcaggcgtcctgggaaaaaccagcaggagacgtggactcg
tacacgttgaccctgctgcaggacagtgccgtggttcagaactacagcgttccagctggt
tcttcttctctgctgatggacggtttgacacccggcgccctctacaggctgcaggccgcc
actgtcagcggaggagttcagtctcaaccaaccagcctgcagggacgcacagtcccagcg
tcggcctccgaggtaacggttgctaacggcggcaggtcggatgctctgcaggtgtcatgg
cgtcctgcagggggcgtggtcgacagctaccaggtgcgtcttcaggacgggagtcgaccc
gtgcacacactggtggtgtcccactcctccctgcccgagtgctccttcagctcgctggtt
gccgggcatctgtacacagtcgccatagtgacgaggagcgctgacatggagaacaccatc
acagttcaagcacggacgcaacctgctactgtgcaaaacccaacagcggttcactctgca
agagacggcttcctcaaggtgtactggcgtcatgcagctggagatctggaccgttatgtg
gttctgatccgttacaaccacagcgtactgcagaacaagagcgtctctgccgggtacaac
gagtgcgccttctcgtccctgacgcctgggagactctacaccgtcaccgtggaaacatgg
agcggcgactacgtcagcagcgtttccaccgacggacgcacatttccagcagctgtgggc
aatctgtcgctaggcaacgtaggaacaggtgatctgactgtgacctggagtcctgcccct
ggagatgtggaccactatgaggtcactctgctcttcaacgacactcgagtttatcctccg
gtcacgttgggcagcgagctgcgacatcaccggctgacctctctgacaccaggacggctt
tataagattgtggtgtcgacgttcagcggtccgaaccagagacctcagttcattgaggga
cggacagttcccagtgcggtaagaaacctccacctggctccccggaaacctctacctggc
ctaacagactctgtgggggggctggtggtctcctggacacctggagatggagacctggac
atgtacatcgtctcactgtcctctacggatggagtcgtggtcgagaatcgcctcgtcccc
aaacacatctcctctctagagttcctggatctgaccccaggccacgcctacaccatcact
gtccaatcacagagcgggaagctgaacaacaccaaaaaagtcacgggcaggacagctccg
gccagagtcacggctctgcaggcggataacgaccacaccacccacagcctcaccgtcacc
tgggagcggccggtgggcgagttcgatggttacagcctgcaggtgttggacgaggccggc
gtcattctggccaatcagtcggtcgccgtggagagtcgcagcgagcggctgggaggcctg
atgtctgggaagtggtaccgcatccggatggtgacgttgagcggcggcgtcccgtcactg
gaggccacagccgagggacaaacacgtcccgctgctgtcagcaatctaacagtcactgtg
tccaacaccacatctctctccttctcttggcgtccctctgacggccacgtcgacatctac
cacctctcgctctacagggttacagaggcaacggccaatcacagacaggatgcttcaggt
agcaggaaggatcgtcaccaggctgctggtgagttagagagccagcagaaagtcggtcca
gctgcagacggctgtgtgttctccggcctgagagcaggaagtctgtacaggctgcaggtg
gtgagctggagccggagcatgaacagcgactcctctgtactcgccagaactgtcccgtct
cccgtctcatcgctgcaggttcagagttcaggacggagagacagactgacagtcagctgg
cagcacggagagggaagatggagcagctaccaggtgatattatacgacgtctcaggagcc
actctcggggcccagatgttgggggcggagcacaacagtcacatgttccttgggctggtc
cctggtaggcgttaccgcgctgatgtcatcacacacagcggagagctgaccaataacatc
tcagcatttggacgcaccacaccagagccgcccactcacctgtccgtcagagaaggccgg
gtcaatgacaccatcgagctgtcgtgggccggtcccgcctccggagactacgacagcttc
agcctgcagtggactcctctcgaccagctgtcaatcacacagactcgactgaccagccgc
atcgtgggcgggatgtttccgggccgacagtacaacttcactgtgatgaccgtcagcgag
gccggggccggaccctcggtcaggagccagccaatccagaggagcgtcaggacaagtcca
gctcctctaaagtccatccactgcttccccgtctcgtcctcctccctctcttgctcgtgg
acggctcctctctctgacttcgactcctacgaggttgagtgtcgtcgccatgacgacggg
aagctgacctcggccctgcggttggcggggggcgtcaccgcggtaacgctggaccacttg
gaggcctaccggaaatactctgtgacagtcagagcgtcgtcggccggccagacgagcccg
cctgcaacacacaccactgttaccatgatagaccgtccgccggtcccgcccccagccgtg
cgtgtcagcgagaagtcatcgaaagtgacgccgtcctccatcttgttccgtttcaactgc
tcctggttcagcgacgccaacggagccgtccgatacttcgctgtcatcgtagccgagtct
gatgccaacgagctcctgcagccggagcagcgccacccgctgccttcgtaccgcgactac
atcaacaactcctccgtcagagcttatcaaaccgcctacttctccagccgctgcccacag
gactccgacacctctgcagcacaggtggtggaggtgaacctgggggcaggaggggaccgt
ctgggcggggcttgtgatcattaccatgacgacgacttctacctgagtgacagctacggt
gacttctgtgacggaccgctgaaagccaaaacttcctacaggctgagtattcgggcgttc
accaaactgtttgacgaaaacaacaaagagtttccacagccgctcttcaccgacacgtac
ctgtcgccaccactcaggacgcatgcagagcctctagggggcgtagtggagggtttgagc
gctgggatgttcctcatcggtatgatggtggccgtcgtctcgctgctggtttacagacaa
cggctacgcaaagtaaatatggcggtgcaacatggcggcctccatggcagaggacctaca
tcccctatagatacacacggctcattctacggaaatgaaaacacaactattcttaatttc
agggctgtgcaggagaacccggtggtgaggatgaatatgtggaaagaagtgccgacttca
gggatatatatgggtgtcaggagcaaccgtcgagtcaccagtcctatcaagatctgtcac
tttgaatcccatctgaacaaacttcaggccgactccaactacctgctgtctgaggagttt
gaggatctgaaggacgtgggtcggaaccagacgatggacgtcgcccggctgccggagaac
cgaggaaagaaccgctacaacaacatcctgccatatgattcaatcagagtgaagctgtcg
tacctggaggacgacccctgctccgactacatcaacgccagctatatacctggtaacaac
taccgcagggagtacatcgccacccagggcccgctgcccggcaccaaggacgacttctgg
aggatggtgtgggagcacggtgtctacaacatcgtcatggtgacacagtgcgttgagaaa
ggaagggtgaagtgtgatcagtactggcctgcagacagagagccgctgtactacggtgac
ctggtcattcagatgctgtcggagtccgtcctgccggagtggaccatccgagagttcaag
atcacctcggagagcggctgtaattatcctcgcgtcctgcgtcatttccactacacggtg
tggcctgatcacggagtcccagagagcacgcagtcactgatccagttcgtcaggacggtc
cgagactacgtggaccgatcacccggcactggagccactgtcatacactgcagtgccggc
gttggacgcaccgggacgtttattgctctggatcgagttctgcagcagatggactctaaa
ggaaccatcgacctgtacggctctgtgttcgaccaacgcttgcaccgccagcacatggtc
cagaccgagtgccagtactccttcctgcatcagtgtgttcgtgacgtcctgagagccagg
aaacatcgcagcgaacaagagaatcctctttaccccatctacgaaaacttcaacccagag
tactaccgcgatttcatctacaccggacgctaa
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integrated database retrieval system
