Scomber scombrus (Atlantic mackerel): 134004245
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Entry
134004245 CDS
T10651
Symbol
tnpo3
Name
(RefSeq) transportin-3 isoform X1
KO
K15436
transportin-3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03013
Nucleocytoplasmic transport
ssco03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134004245 (tnpo3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
134004245 (tnpo3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssco03016
]
134004245 (tnpo3)
Transfer RNA biogenesis [BR:
ssco03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
134004245 (tnpo3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
IBN_N
TOR1L1_N
Importin_rep_3
Motif
Other DBs
NCBI-GeneID:
134004245
NCBI-ProteinID:
XP_062299440
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All DBs
Position
22:24307681..24319651
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AA seq
925 aa
AA seq
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MEGGKPNLSLVYQAVQALYHDPDPAGKERASVWLGELQRSMYAWEISDQLLQLKQDVESC
YFAAQTMKMKIQTSFFELPPETHTALRDSLLTHIQNLKDLSPIIVTQLALAIADLALQMA
SWKGCVHTLIEKYNSDISSMPFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSSTV
VTLLTSCVEKTGNDEKMLIKVFRCLGSWFNLGVLDSNFMASNQLLMVLFQVLQRDETSTN
LHEAASDCVCSSLYAIENVETNVALALQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFT
ELCETFLETTVRSPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKINDAA
LHSIFRPYIQRLLHCLARHCQLDPDHEGIPEDTDDFGEFRMRVSDLVKDVIFLVGSMECF
SQLYSTLKEGNPPWEVTEAVLFIMAAIAKSVDPENNPTLSEVLQQVVLLPESVHMAVRYT
SIELVGEMSEVVDRNPRFLDPVLNYLMKGLREKPLASAAAKAIHNICSVCRDHMAQHFQG
LLDIARALDTFALSTEAAVGLLKGTALVLGRLPLEKIAECLSDLCAVQVLALKKVSLLSA
DSTNGKSADPTVWLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNTHQADNRI
VERCCRCLRFAVRCVGKGSASLLQPLVTQMVGVYQVYPHSCFLYLGSILVDEYGMEEGCR
QGLLDMLQALCMPTFQLLEQPNGLRNHPDTVDDLFRLATRFVQRSPVTLLSSSIIVHIIQ
CAIAATSLDHRDANCSVMKFVRDLIHTGVANDHEEDFEVRKQLIGQAMEQHGQQLITQLM
HSCCFCLPPYTLPDVAEVLWEVMMFDRPTFCRWLESALKGLPKETSGGAVTVTHKQLTDF
HKQVTSAEECKQVCWAIREFTRLFR
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggaggggggcaagcccaacctgagcctggtgtaccaggcggtgcaggccctgtaccac
gacccggacccggccgggaaggaacgagcctcggtgtggctgggagagctgcagagatcg
atgtacgcgtgggagatttcagaccagctgctgcagctcaaacaggatgtggagtcgtgt
tatttcgctgctcagacgatgaagatgaagatccagacgtcgttcttcgagctgccgcca
gaaacccacacggccctgagagactccctgctgacccacatccagaacctcaaagacctg
tcccccatcatcgtcacccagctggcgttggcgatcgctgatctcgccctgcagatggcc
tcgtggaaaggatgcgttcacacgctcatagaaaagtacaacagtgacatcagctccatg
cccttcctgatagagatcctcaccgtgctgccggaggaagttcacagccgctcgctgagg
atcggagccaatcggaggacggagatcatcgaggacttggcgtattattcgagcactgtg
gtgaccctgctgacgtcgtgcgtggagaagacggggaacgatgagaagatgctcatcaag
gtgtttcgctgtctgggcagctggttcaacctgggagtcctggacagtaacttcatggcc
agtaaccagctgctcatggtcctgttccaagtcctgcagagagacgaaacctccaccaac
ctccacgaggcggcgtcggactgcgtgtgctcttcgctgtacgccatcgagaacgtggag
accaacgtggcgttagctctgcagctgttccagggtgtcctgacgctggagacggcctat
cacatggcggtggcccgagaggacctcgacaaagtgctgaactactgcaggatcttcacc
gaactctgtgagaccttcttagagaccactgtcaggagtccaggccagggcatgggggac
ctgaggaccctggagctgctgctgatctgtgcaggacaccctcagtacgaggttgtggag
atctcctttaacttctggtaccgcttgggagaacacttgtataagatcaacgatgcagct
ctgcacagcatcttcagaccgtacatccagagacttctgcactgtttggctcgacactgt
cagctggatccagaccacgaaggaatcccagaagacacagatgatttcggggagttcagg
atgagagtgtccgacctcgttaaagacgtcattttcctggttggttctatggagtgtttc
tctcagttatattctacattaaaagaagggaatcctccctgggaggtgacagaagctgtt
ctcttcatcatggctgccatcgccaaaagtgtcgatccagagaacaacccgaccctgtcg
gaggtgctgcagcaggtggtgttgctcccagaaagcgtccacatggcggttcgatacacg
agcatcgagctggtcggagagatgagcgaggtggtggacagaaacccccgattcctcgac
ccggtgctgaactacctgatgaagggtttgagggagaagcctttggcatcagcagcagcg
aaggcgatccacaacatctgctcagtgtgcagagatcacatggctcaacacttccagggt
ctgctggacatcgctcgcgccctcgacaccttcgccctgtccaccgaggccgccgtcgga
ctgctcaaaggtacggctctggttcttggtcgtcttcctctggagaagatcgctgagtgc
ctcagtgatctctgtgctgtccaggtcctggccctgaagaaggtcagtctcctgtctgca
gactctacaaacggtaaatcagctgatccgaccgtgtggctcgacagactcgccgtcatt
ttcagacacacaaacccgatcgtagagaacggccagacacacccctgtcagaaagtcatc
caggagatctggccggtgctgtcggagactctgaacactcatcaggctgataacaggatc
gtggagcgatgctgtcgctgtctcaggttcgctgtacgatgtgttgggaaaggctccgct
tcactgctgcagccactggtcactcagatggtgggtgtgtaccaggtgtatccacactcc
tgcttcctgtacctgggcagtatcctagtggacgagtacggcatggaggagggctgcagg
cagggactactggacatgctgcaggccttgtgcatgccgaccttccagctcttggagcag
cccaacggtttgaggaatcatcccgacaccgtggacgacctgttcagactggccaccagg
ttcgtgcagcgcagccccgtcactttactcagcagcagcatcatcgttcacatcatccaa
tgcgccatcgccgccacctcattggaccaccgagacgccaactgcagcgtgatgaagttt
gtgcgtgacctgatccacaccggtgtggccaacgaccacgaggaggacttcgaggtaagg
aagcagctgattggtcaggccatggagcagcacggccagcagctcatcacccagctcatg
cactcgtgttgtttctgtttgccgccgtacacgctgcccgacgtcgccgaggtcctttgg
gaggttatgatgttcgaccggccgacgttttgccgctggttagaaagcgctctgaaaggt
ttaccgaaggagacgtcaggaggagcggtgacggtgactcacaaacagctgacagacttc
cacaaacaggtcacgagcgctgaggagtgtaaacaggtgtgctgggccatcagagagttc
accagactgttccgatag
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