Entry
Symbol
nup50
Name
(RefSeq) nuclear pore complex protein Nup50 isoform X1
KO
K14295 nuclear pore complex protein Nup50
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
Brite
Messenger RNA biogenesis [BR:ssco03019 ]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134004255 (nup50)
BRITE hierarchy
SSDB
Ortholog Paralog Gene cluster GFIT
Other DBs
LinkDB
All DBs
Position
22:23037102..23050588
Genome browser
AA seq
478 aa AA seq DB search
MAKRIADKELTDRNWDQEEEGEEAGTFSLASDNVLKNRAIKKAKRRNIGGESEVSTAFKG
FKGFAMTAAAASSAPSGAATPTLFAGFGNGGGFKGIGGLTNGNSISPSFGGFSSPGATSS
ATPGLTFNGPSSTKPSDDVIGKQTNGSSLSSSQSSSSSSGNKEYSRQLTALNCSVRDWIT
KHVNDNPLCDLNPIFRDYERHLASIERQYGAGAAADGGSEEKKKQGAMLPTKASPPPPSS
SSSSSSSSSSSSSSSSSSGSSSAAGPTPAALFSFGKDKTDKTAPIPVGVTFNFGQKVDSS
ALGSLGSKSTPPSFSFSSSSSSSSLFGAPGSFGGKKAEEAQPAADENGDEESDEPPKPEI
KEVHEDDAFYSKKCKLFYKKETEFKEKGVGTLHLKQTADGKTQMIIRADTNLGNILLNIM
VQPSMPCTRVGKNNVMVVCVPNPAVDDKNPTSPVPLLIRVKTADDADELHKTLEEKKG
NT seq
1437 nt NT seq +upstream nt +downstream nt
atggcgaagaggatcgcagataaagagctaacggacaggaactgggatcaggaggaggag
ggagaggaggccgggacgttttcactggcgagtgacaatgtgttgaagaatcgggcgatt
aagaaagccaagcgccgaaatatcggaggagagagtgaggtgagcacagccttcaagggt
tttaaagggtttgctatgacggcggcggcggcgtcctcggcgccgagcggagccgccact
ccgacgctgttcgctggattcgggaacggcggcggctttaaaggcatcggcggtctgacc
aacgggaacagcatcagtccgtcattcggaggtttctcgtctcctggtgcgacgtcgtcc
gctacgcctggtctgacgtttaacggcccctcctccaccaaacccagcgatgacgtcatc
ggtaagcagaccaacggctcctcgctgagctcgtctcagagcagcagcagcagcagcggt
aataaggagtacagccggcagctcaccgctctcaactgctcggtgcgagactggatcacc
aaacacgtgaacgacaacccgctgtgcgacctcaaccccatcttcagggattatgagcgg
cacctggccagcatcgagcggcagtacggagccggagctgctgctgacggaggctcggag
gagaagaagaagcagggagcgatgctgccaactaaagcctcccctcctcctccttcctcc
tcttcttcttcctcctcctcctcttcttcctcctcctcttcttcctcctcgtccggcagc
agctcggcggcgggtccgactccggccgctttgttctcctttggcaaagataagacggac
aaaactgctccgatccccgtcggcgtcacgtttaacttcgggcagaaggtggacagctca
gctctgggctccttagggtccaaatcgacgcctcccagcttctccttctcctcctcctcc
tcctcttcctccctgttcggagcgcccggctccttcggcgggaagaaagcggaggaggct
cagcctgcagcagacgagaacggagacgaagagtcggacgagccgccgaagccggagatc
aaagaggttcacgaggacgacgccttttactccaagaagtgtaaattgttctataagaag
gagactgagtttaaagagaaaggagtgggaacgctgcacctcaaacagaccgccgacgga
aagactcagatgatcatcagagccgacaccaacctgggaaacatcctgctgaacatcatg
gtgcagccgtcgatgccgtgcaccagagtgggcaagaacaacgtgatggtcgtgtgcgtc
ccgaacccggccgtggacgacaagaacccaaccagccccgtccctcttctgatccgggtc
aagacggccgacgacgccgacgagctccacaaaacgctggaggagaagaaaggctga