Scomber scombrus (Atlantic mackerel): 134004255
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Entry
134004255 CDS
T10651
Symbol
nup50
Name
(RefSeq) nuclear pore complex protein Nup50 isoform X1
KO
K14295
nuclear pore complex protein Nup50
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134004255 (nup50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssco03019
]
134004255 (nup50)
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134004255 (nup50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
SR-25
Motif
Other DBs
NCBI-GeneID:
134004255
NCBI-ProteinID:
XP_062299456
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All DBs
Position
22:23037102..23050588
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AA seq
478 aa
AA seq
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MAKRIADKELTDRNWDQEEEGEEAGTFSLASDNVLKNRAIKKAKRRNIGGESEVSTAFKG
FKGFAMTAAAASSAPSGAATPTLFAGFGNGGGFKGIGGLTNGNSISPSFGGFSSPGATSS
ATPGLTFNGPSSTKPSDDVIGKQTNGSSLSSSQSSSSSSGNKEYSRQLTALNCSVRDWIT
KHVNDNPLCDLNPIFRDYERHLASIERQYGAGAAADGGSEEKKKQGAMLPTKASPPPPSS
SSSSSSSSSSSSSSSSSSGSSSAAGPTPAALFSFGKDKTDKTAPIPVGVTFNFGQKVDSS
ALGSLGSKSTPPSFSFSSSSSSSSLFGAPGSFGGKKAEEAQPAADENGDEESDEPPKPEI
KEVHEDDAFYSKKCKLFYKKETEFKEKGVGTLHLKQTADGKTQMIIRADTNLGNILLNIM
VQPSMPCTRVGKNNVMVVCVPNPAVDDKNPTSPVPLLIRVKTADDADELHKTLEEKKG
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaggatcgcagataaagagctaacggacaggaactgggatcaggaggaggag
ggagaggaggccgggacgttttcactggcgagtgacaatgtgttgaagaatcgggcgatt
aagaaagccaagcgccgaaatatcggaggagagagtgaggtgagcacagccttcaagggt
tttaaagggtttgctatgacggcggcggcggcgtcctcggcgccgagcggagccgccact
ccgacgctgttcgctggattcgggaacggcggcggctttaaaggcatcggcggtctgacc
aacgggaacagcatcagtccgtcattcggaggtttctcgtctcctggtgcgacgtcgtcc
gctacgcctggtctgacgtttaacggcccctcctccaccaaacccagcgatgacgtcatc
ggtaagcagaccaacggctcctcgctgagctcgtctcagagcagcagcagcagcagcggt
aataaggagtacagccggcagctcaccgctctcaactgctcggtgcgagactggatcacc
aaacacgtgaacgacaacccgctgtgcgacctcaaccccatcttcagggattatgagcgg
cacctggccagcatcgagcggcagtacggagccggagctgctgctgacggaggctcggag
gagaagaagaagcagggagcgatgctgccaactaaagcctcccctcctcctccttcctcc
tcttcttcttcctcctcctcctcttcttcctcctcctcttcttcctcctcgtccggcagc
agctcggcggcgggtccgactccggccgctttgttctcctttggcaaagataagacggac
aaaactgctccgatccccgtcggcgtcacgtttaacttcgggcagaaggtggacagctca
gctctgggctccttagggtccaaatcgacgcctcccagcttctccttctcctcctcctcc
tcctcttcctccctgttcggagcgcccggctccttcggcgggaagaaagcggaggaggct
cagcctgcagcagacgagaacggagacgaagagtcggacgagccgccgaagccggagatc
aaagaggttcacgaggacgacgccttttactccaagaagtgtaaattgttctataagaag
gagactgagtttaaagagaaaggagtgggaacgctgcacctcaaacagaccgccgacgga
aagactcagatgatcatcagagccgacaccaacctgggaaacatcctgctgaacatcatg
gtgcagccgtcgatgccgtgcaccagagtgggcaagaacaacgtgatggtcgtgtgcgtc
ccgaacccggccgtggacgacaagaacccaaccagccccgtccctcttctgatccgggtc
aagacggccgacgacgccgacgagctccacaaaacgctggaggagaagaaaggctga
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