Scomber scombrus (Atlantic mackerel): 134004299
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Entry
134004299 CDS
T10651
Name
(RefSeq) DENN domain-containing protein 2A-like
KO
K20161
DENN domain-containing protein 2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
134004299
Membrane trafficking [BR:
ssco04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
134004299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
Motif
Other DBs
NCBI-GeneID:
134004299
NCBI-ProteinID:
XP_062299507
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All DBs
Position
22:complement(9721492..9731222)
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AA seq
1079 aa
AA seq
DB search
MNTWKLYSRRRCTVIMAATKRMTTGPDCIYSTINRLKKGCIGEKSGFHSASVENKGAEHR
QEGIPKLPFTQLQNLSNQLEDSPMMAHRRPTLDPHGNDNALLGGNKFPRSNGGNIKDKIS
LWEGKEPAHSTVTSCSSGQCVKRTESLTKNNNKTAVEQRVEGGRRVAYKENQDLEKENVG
KLGDSRPCSPVETGKQQRGTLRTSKPSENKRGEDCGRLAHKEKQDHEKENVEKIGDSRPC
SPEVMDKQQVGTLRRSNDKRTSEQPSQEKRAVFTLFKKLEAMGENHGKTLPELGNYFTPP
SKDKQVEVKKKESESTGQISAGKCSATRDRKQQQQENVYTEPGTPPINPVPKPHRTFQHP
ATIHMAKSQRQRNLPPLPSMSTRAASKPPLGVYGRPRGERVRGNINRKSFEFEDIPGSNS
AFFTHSLSQEHHYEDILDSSKENPYEDIELESQCSQQSLPSSPGADTTKISRPGFFRQNS
GRSFKLLDLRRTNQQTHSISSSGVSSPPHLSPPSTPLGPEQTPWLTGDPFSRTCRRIPTV
VLKINSVFEARIRKKHLRRIYHYAETSSGRVTDENSDSESEVEDRAKAQRRRLVSVKSIL
SRPSQNQVQYNGTNSTSRSLEQELHQRQLFEYFLVVSLQKSKAGGHYLPEVTQQFPPKLE
RSFKFMRETEDQLRIIPQFCFPDAKDWEPVENYPSEMFSFVLTGEDGSRRFGYCRRLLPS
GKGKRLPEVYCIVSHLGCFNLFSKVLDEVERRRALSPALVQPFMRAIMEAQFPAPGRTIT
VKTFLPGSGTEVMELCRPSDSRLEHVDFECLFSCLSLRLLLRVFASLLLERRVIFTADNL
STLSQCCHAVVALLYPFVWQHTYIPVLPSAMLDIVCTPTPFLVGLLSSELPQLTELPLEE
VLVVDLGNSRFLRQLDDEDSILPSKLQSALENILERRRELANDRGGDTPMDSGHLGTVVS
EAFVRFFVELVGHYPLFIISEREDGYSSSSSSPVPCSFQREGFRKAILSKTGRRFLEVFM
ETQMFGWFIQERELHRQALRGLFEVRVQEYLDSIHENEHRRVNRFLKGLGNKMKFLSKK
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgaacacatggaaactgtacagcagaaggaggtgtacagtgatcatggcggccactaag
agaatgacaacggggccggactgcatctactccaccatcaacaggttaaagaaaggctgt
attggtgagaaaagtggtttccatagtgcttcagtggaaaacaaaggggctgagcacaga
caagaggggataccaaaacttcccttcacccaattacaaaacctgagcaaccagttggag
gattcacccatgatggctcacaggagaccaacccttgaccctcatggcaatgacaatgct
cttttggggggcaacaagttccccagatccaatggaggtaacatcaaggacaagatctct
ctgtgggagggaaaggagcccgctcattcaactgtcacctcatgttcctcgggccagtgc
gttaaaaggactgagtcactgacaaaaaacaacaataaaactgcagttgagcagcgtgta
gaaggtggcaggagagtagcctacaaagaaaaccaagatcttgagaaagagaatgtggga
aaacttggagattcgaggccttgctcaccagttgaaactgggaaacagcaaagaggaaca
ctcaggaccagcaaaccaagtgaaaataaaagaggggaggattgtgggagattagcccac
aaagaaaagcaagatcacgaaaaggagaatgtagaaaaaattggcgattcaagaccttgt
tcgcctgaggtgatggacaagcaacaggtggggacgttgaggagaagcaatgacaagaga
acatctgaacaacctagtcaggagaagagagctgtgttcactctttttaaaaagctggag
gctatgggagagaaccacgggaaaactcttccagaactcggaaactatttcaccccgcca
agcaaggacaaacaggtggaggtgaaaaagaaagaatctgaatctactggtcaaattagt
gcagggaaatgctctgcgaccagagacaggaagcagcagcaacaggagaatgtctacaca
gagccagggacgcccccgatcaacccagtccccaaaccccatcgcactttccagcaccca
gctaccatccacatggcgaagagtcaaaggcagaggaacctcccaccactgccctcaatg
tctacacgagctgcctcaaaacctcctctaggtgtctacgggagaccgcggggtgagaga
gtcagaggcaacatcaacaggaaatcctttgagtttgaagacatcccagggtcaaatagc
gcgttcttcactcactcgctgtctcaggagcatcactatgaagacatcctggactcgtcc
aaggagaacccatatgaggacattgagttggagagtcagtgctcccagcagtctttgccc
tcctcccctggcgctgacactaccaagatctcaagacccggcttcttcaggcagaattca
ggtagaagctttaagctgctggacctgcggagaaccaaccagcagacccacagcatcagc
agcagtggtgtttcatctccaccccacctcagccctccctccaccccacttgggcctgaa
cagacaccctggctgactggggaccccttcagccgcacatgccgtaggataccaacggtt
gtactgaaaatcaatagtgtctttgaggctcgaatcaggaagaaacatctcagaagaatc
tatcattatgcagagacaagctcagggagagtgacagatgaaaacagtgattctgagagt
gaggtggaggacagagcaaaagctcagcgtcggcgcctggtgtcagtcaagtccatactg
agccgtccaagccagaatcaggtccagtacaatggtaccaacagcacaagcaggtctctg
gaacaggagcttcaccagcgtcagctgtttgaatatttcctggtggtgtctctgcagaag
tcgaaggctggcggccactatctgccggaggttacacagcagttcccccctaagctggag
cgcagcttcaagttcatgagggaaacggaggatcagctgaggatcattcctcagttctgt
ttccctgatgctaaagactgggagccggtggagaactacccaagtgagatgttctccttt
gttttgactggagaggatgggagcaggaggttcggatactgtcggcgtttactgcccagt
ggaaaaggcaaacgtctgccagaagtctattgtattgtcagtcacctcggctgcttcaac
ttgttctccaaggtgttggatgaggtggagaggcggagggctctgtctccagctctggtg
cagccattcatgagagcaatcatggaggcccagtttccagctccgggaagaaccatcacc
gtcaaaaccttcctccctggctcaggcactgaggtgatggagctctgtcgtccctctgac
tcccgcctggagcatgtggactttgagtgtctgttctcctgtctgagtctgcggctgctc
ctcagggtgtttgcctctctgctgctggagcgaagggtcatattcacggctgataatctc
agtactctgtcacagtgctgccatgcagtggtggcgctactttacccttttgtatggcag
cacacctacatcccagtactaccctcagcgatgctcgacattgtctgcacaccaacccca
ttcctcgtcggcctgctgtccagcgaactgcctcagctcactgagctacccctggaggag
gttctggttgtggatcttggaaacagtcgatttcttagacagttggatgatgaagactcc
atcctgccctctaagcttcaatcagccctagagaacattctggagaggagaagagaactt
gctaatgacagaggaggagatacacccatggactctggccatctcggcactgttgtatcc
gaggcctttgtccgtttctttgtggagctggtgggccactatccacttttcatcatcagt
gaacgggaggatggttactcctcctcgtcatcctcccctgtcccctgctccttccagcgc
gagggttttcgtaaagcaatcctgtctaagactgggcgtcgcttcctggaggtcttcatg
gagacccagatgtttggctggttcatccaggaaagagagctccacaggcaggccctgcga
gggctgtttgaagtgagggtgcaagagtatctagactccatccatgaaaatgaacaccgg
agggttaacaggtttctcaaaggcttaggaaacaaaatgaaatttctgtcaaagaaataa
DBGET
integrated database retrieval system
