Scomber scombrus (Atlantic mackerel): 134004454
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Entry
134004454 CDS
T10651
Name
(RefSeq) high affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
134004454
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssco02000
]
134004454
Transporters [BR:
ssco02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
134004454
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Gene cluster
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
134004454
NCBI-ProteinID:
XP_062299714
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Position
22:20441183..20450652
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AA seq
557 aa
AA seq
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MAVNWLGMLSIAVFYAIVLGIGIWASRKAKQEEKKCTGNRSEVVMVGGRNLKLWVSILTM
TATWVGGGYVLGNAEVVYDPSKGLVWAIGPIAFALNLIFGGLFFVKPIRKKNYVTLMDPF
QEKYGNTIAAVLFIPALLADVLWVACILGALGGTVSTVLDIQSSLAVAVSAAVAIIYTLM
GGLYSVAYTDVIQLGFVFVGLWLCVPFILTSPSSADIASTAMTKLYQAPWIGKLALEDAG
RWIDNFLLVSIGGLCYQSFYQRVLSSATDAQAKITCYAGAALCLILGIPSIIIGAVAAST
NWNQTTFGSPTPFEQGKAGMILPIALQHLCPVYISLIGMGALAAAVMSSIDSILLSSASQ
LGRNIFKNIIYKQASEKTILVVVKVSIFLCGLMGAGLAMTTTSVNLLWIVSADVLYSILT
PQLICTFFLPQRVNHYGACSGFVLALILRVLVGEPQLGLPDVLPLPWDKIQEDGRRFRLF
PFCTAIMLMTTGTIVLVSRLTVWLSEKKLLTINDAETDTDNTDYMVPLRTDTMKTGELNK
EQLHLFSPGGNEEEEKC
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgaactggctaggaatgctgtccattgcagtgttttatgcgatcgtactgggc
attggtatttgggcgtccaggaaggcaaaacaagaagagaagaagtgtaccgggaaccgc
agtgaggttgtgatggttggagggcggaacctaaaactctgggtcagcatccttactatg
acagccacttgggtgggaggtggctatgttttaggtaatgctgaagtggtctacgatcct
agtaaggggttggtgtgggccatcggacccattgcctttgcccttaacctgatatttggc
ggactcttctttgtcaaacctatccggaaaaagaattacgtcaccctcatggacccattt
caagagaaatacggcaacactatagctgctgtcctcttcatccctgctctccttgcagat
gtcttgtgggtagcatgtattcttggtgcattgggtgggacagtaagcaccgtcttggat
atccagtcctcgctagctgtggccgtctctgctgctgtagcaatcatttacacattgatg
ggagggctgtattctgtggcctatactgatgtcatccagcttggctttgtgttcgttggc
ttgtggctttgtgtcccttttatcctcacaagcccctcctctgctgacatcgcctctact
gcaatgaccaaactgtaccaggcgccatggattggcaagctagcgctggaagatgcaggt
cgctggatagataacttcctgttagtgtccattggagggctttgctaccagtccttctac
cagagagtcctgtcctcagccactgatgcccaagctaagatcacatgctacgctggagca
gcattatgcctgatccttggcatcccatcaatcatcattggggcagtggcagcatctact
aattggaaccagaccaccttcggatcacccacccccttcgaacaaggcaaagctggtatg
atcttaccaattgcccttcagcacctttgccctgtctacatatctctgattggtatggga
gcactcgcagcggcggtgatgtcatctattgactctatccttctgtcttcggcctctcaa
ctgggccgaaatatcttcaagaacatcatctacaaacaagcatcggaaaaaactattctt
gtggtggtcaaggtatcgatcttcctttgcggactgatgggagcgggcctcgccatgaca
accacctctgttaaccttctctggattgtcagtgcagatgtcttgtattcaatactgact
ccccagctgatatgcaccttcttcctaccccagcgggtgaaccactacggagcatgttct
ggctttgtgttggcactgattctgcgagttctggtcggggaaccccagttgggcctccct
gacgtgcttcccctgccgtgggacaagatccaagaggatggccgccgattccgcttattc
cccttttgcactgccatcatgctcatgaccactgggactattgtgctggtatctcgtctg
actgtgtggctctctgagaagaagctgctgacaataaatgacgctgaaacggacacagac
aacacagactatatggtaccgctccggacagatacaatgaaaacgggagagctgaataaa
gaacagcttcacttattctcgccaggaggcaacgaagaagaggaaaaatgttaa
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