Scomber scombrus (Atlantic mackerel): 134004491
Help
Entry
134004491 CDS
T10651
Symbol
hcfc2
Name
(RefSeq) host cell factor 2 isoform X1
KO
K27390
host cell factor 2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134004491 (hcfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssco03036
]
134004491 (hcfc2)
03029 Mitochondrial biogenesis [BR:
ssco03029
]
134004491 (hcfc2)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL-HCF complex
134004491 (hcfc2)
Mitochondrial biogenesis [BR:
ssco03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
134004491 (hcfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
Kelch_FKB95
fn3
zf-FCS_1
Plasmodium_Vir
Motif
Other DBs
NCBI-GeneID:
134004491
NCBI-ProteinID:
XP_062299774
LinkDB
All DBs
Position
22:6951605..6958815
Genome browser
AA seq
755 aa
AA seq
DB search
MGTCVEEPQWRKIHSVTGVVPRSRHGHRAAVIRELVVVFGGGNEGIAEDLHVYNTVSKQW
FLPAVRGDIPPGCAAHGFVCDGTRILVFGGMVEFGKYSNSLYELQASRWLWKKLKPRAPR
NGLPPCPRIGHSFTLMANKCYLFGGLANDSEDPNGNVPRYMGDLYELELQSISGARGWSI
PETKGCGPPARESHTSVVYTGLGSPKLYIFGGMQGCRLDDLWQLDLDTMVWSKPQTRGSM
PVPRSLHSASVIGNKMYVFGGWIPVPESVEPIALGTEWICTNSLSVLNLDTMIWQNLGPE
QQDDIESQLQSQGPQSDDQYACSPRARAGHCAAAIGSRLYIWSGRDGYRKSWNYQVCCKD
LWYLETDRPATPEAVLLIKSTVSMLHVAWRPLAAADCYILQIQPVCPPSTAAGAPPAKPV
DPSRADGREGKDGDPAGVQSLQAQSEGNTKKGENTSSQDVSAQQETPVKSSGGRETEEKS
DTKRCTARQETSSAEVSSSTQHPSDNQPATADKKTDLYGHTDQQNPDKAVWFDVGVFKTL
FSEVNHYFLPADNEPATTGISSRPQNTKEKKQPVPQDYQDREKQELAPGQTYRFRVVGFN
CFGQGDFSPVSEFKTCQPGFPGAPSAVKITKASDSVHITWEAPPSPSGRILEYSMYMAVK
KSRSTSSERPGQMAFIRIYRGTKTFCSVSSSHLYNAQIDCSASNRPAVVFRIAAKNEQGY
GPATQIRWIQDPSKLRGAAKSDSAEADQDAADSSS
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgggcacctgtgtcgaggagccgcaatggagaaaaatccactcagttaccggagtggta
ccgcggtccagacacggacaccgagcagcagttattcgggagctggtcgttgttttcgga
ggcggaaatgaagggatagcggaggacctccatgtttacaacaccgtctcaaagcagtgg
tttcttcctgctgtgaggggtgacatcccaccaggctgtgctgcacacggctttgtctgt
gatggcactcgaatactggtcttcggcggcatggtggagttcggcaaatactccaacagc
ctgtatgaacttcaggctagtcgctggctgtggaagaagctgaagcccagagcacccagg
aatggcttgcctccctgccctcggatcggacacagcttcactctcatggctaacaagtgt
tacctgtttggagggctggccaatgacagtgaggaccctaatggcaatgtcccacggtac
atgggagatttgtatgagctggagctgcagtcaatatcgggggcgagaggatggagcatc
ccggagacaaaaggttgtggtcccccagcgcgggagtcccacacatcggttgtttacact
ggcctgggttctccaaagctttacatctttggagggatgcaaggatgccggttagacgac
ctctggcagcttgacctcgacacaatggtttggtcaaagcctcaaacaaggggttctatg
ccagtaccaagaagccttcactcagccagtgttatcggaaacaagatgtatgttttcggt
ggctggattcctgttccagagtccgtcgaacctatcgctttaggaactgaatggatctgc
actaactccttaagtgtgctcaacttagacactatgatctggcagaatctgggcccagag
cagcaggatgatatagagtcccagctgcagagccaggggccccagagcgacgaccagtac
gcctgcagtccccgagccagggccggccactgcgctgccgccatcggatccaggctttac
atttggagcggccgcgacggataccgcaagagctggaactaccaggtctgctgcaaggac
ctctggtacctggagacagaccgaccagccaccccagaggcagtgttactcatcaaatcc
acagtcagcatgctccacgtggcgtggcgccctctggcagcggcggactgctacatcctg
cagattcagcccgtgtgtcctcccagcaccgcagccggcgctccgccagccaaaccggtt
gatccaagcagagcagatggacgggaggggaaagatggagatcctgcaggtgtccagtcc
cttcaagctcaaagtgaaggaaacactaaaaaaggggagaacacttcatctcaggatgtt
tcagcacagcaggaaactccagtgaaatcatccggtgggagagagacggaagaaaagtcc
gacactaaacgctgcactgctcgacaggaaacgtcatcagccgaggtcagcagctcaact
cagcacccgtcagacaatcaacctgctacagctgacaagaagacagatttgtacggccac
acagatcagcagaatccagacaaagcggtgtggtttgatgtcggcgtgttcaaaacactt
ttctccgaggtcaaccactactttctgccagctgataacgagccggccactacaggcatc
agcagccgaccccaaaatactaaagagaagaagcagccagtgcctcaggactaccaggac
agagagaagcaggagctggctccaggtcagacctacaggttcagagtggtaggctttaac
tgcttcggccaaggagacttcagccccgtcagcgagtttaagacctgccaacccggcttc
cctggagcgccctctgctgtcaaaattaccaaggccagcgattcggtccacatcacatgg
gaggcgcccccttctccatcaggccggatcctggagtattccatgtacatggcggtgaag
aagagtcgatccaccagctcggagcgcccgggtcaaatggccttcatccgaatctaccgc
ggcaccaagacgttctgctcggtcagctccagccacctgtacaacgcccagattgactgc
tccgcctccaaccgacctgccgtcgtcttccgcatcgccgccaagaacgagcagggttac
ggccccgccacgcagatccgctggattcaagatcccagtaaattgcgaggcgccgccaag
tcagacagcgccgaggctgaccaggatgctgctgacagctccagctga
DBGET
integrated database retrieval system
