Scomber scombrus (Atlantic mackerel): 134004556
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Entry
134004556 CDS
T10651
Symbol
atp2b1a
Name
(RefSeq) plasma membrane calcium-transporting ATPase 1 isoform X1
KO
K05850
P-type Ca2+ transporter type 2B [EC:
7.2.2.10
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04020
Calcium signaling pathway
ssco04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
134004556 (atp2b1a)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
134004556 (atp2b1a)
Enzymes [BR:
ssco01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.2 Linked to the hydrolysis of a nucleoside triphosphate
7.2.2.10 P-type Ca2+ transporter
134004556 (atp2b1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cation_ATPase_C
E1-E2_ATPase
ATP_Ca_trans_C
Cation_ATPase_N
Cation_ATPase
Hydrolase
Hydrolase_3
Afi1
Phage_tail_tube_init
Motif
Other DBs
NCBI-GeneID:
134004556
NCBI-ProteinID:
XP_062299864
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Position
22:18382987..18425338
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AA seq
1244 aa
AA seq
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MANNSYSGVKNSTAEANHDGEFGCTLKDLRSLMELRGAEAINKIGETYGDVQGLCSRLKT
SPIDGLSGQPADIEKRKTEFGQNLIPPKKPKTFLQLVWEALQDVTLIILEVAAIVSLGLS
FYKPPGAERENCGNAAGGVEDEGESEAGWIEGAAILLSVVCVVLVTAFNDWSKEKQFRGL
QNRIEQEQKFTVIRGGQVIQIGVAEIVVGDIAQIKYGDLLPADGVLIQGNDLKIDESSLT
GESDHVKKTLEKDPMLLSGTHVMEGSGRMLVSAVGVNSQTGIIFTLLGAGDDEGDEEEKK
EKEEKKKQRKNKKQDGAVENRKKAKAQDGAAMEMQPLNSDEGADAEDKKKANLPKKEKSV
LQGKLTKLAVQIGKAGLVMSAITVIILVVLFVVDTFWIQNLPWIKECTPIYIQFFVKFFI
IGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLT
MNRMTVVQAFMAEKHYRKVPEPESVPSSILDMLILGIAVNCAYTTKIMPPEKEGGLPRQV
GNKTECALLGFSVDLKRDYQTIRNEIPEEKLYKVYTFNSVRKSMSTVLKMADGSYRMFSK
GASEILLKKCYKIMTANGESKVFRPRDRDDMAKKVIEPMASEGLRTICLAYRDFPVSDGE
PDWDNENDILSGLTCLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARAIATK
CGILLPGDDFICLEGKEFNRRIRNEKGEIEQERIDKIWPKLRVLARSSPTDKHTLVKGII
DSTVIEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKA
VMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLA
LATEPPTEALLLRKPYGRNKPLISRTMMKNILGQGVYQLVIIFSLLFAGEKVFDIDSGRN
TPLHAPPSEHYTIVFNTFVLMQLFNEINARKIHGERNVFEGIFNNLIFCSIVFGTFIIQI
VIVQFGGKPFSCVALTIDQWLWCTFLGFGSLLWGQVISSIPTSRLKFLKTAGHGTQKEEI
PDEELEELDDMDEIDHAERELRRGQILWFRGLNRIQTQIRVVNAFRSSISLYEGLEKPES
RSSIHNFMTHPEFRIEDSEPHIPLIDDTDAEDDAPTKRNSASPRNTSPTPPSPATAAPPT
APVSPSLNQNNNAVESSNHLLPEGTKSGTPSAPGSPLHSLETSL
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaactcgtacagtggggtgaagaactccacggcggaggccaaccacgatgga
gagtttggctgcacgctcaaagacctgcgctccttaatggaactgagaggcgcagaggcg
ataaacaaaattggggaaacttacggggatgttcaaggactctgcagccgattaaaaaca
tcacctatagatggtctaagtggacagcctgcagacattgagaagcggaaaacggagttt
gggcaaaatttaataccacccaaaaagcctaaaactttcttacagttagtgtgggaggca
ctacaggatgtcacactgattatcctagaagtggcagccatagtttcactaggcctttct
ttttataaacctccaggtgccgagagagaaaattgcggaaatgctgctggcggtgtggag
gatgaaggtgagtcggaagcaggttggattgagggtgccgctattcttttgtccgtggtc
tgcgtggtactggtgacagcattcaatgactggagtaaagagaagcagtttaggggcctc
cagaaccgtattgagcaggagcagaaatttactgttatccgtggaggacaagttatccaa
attggtgtggctgagatcgtggttggagacattgcacaaataaaatatggtgaccttttg
cctgctgatggagtcctcatccaaggcaatgatctgaagatagatgagagctcactcaca
ggggagtcggaccatgtcaagaaaacactagaaaaagatccaatgctgttatcaggcacc
catgtcatggagggctcagggagaatgttggtcagtgctgtgggtgtcaactctcaaact
ggaattatcttcactttactcggggccggtgacgatgagggcgacgaggaagagaaaaag
gaaaaggaggagaagaagaaacagagaaaaaacaagaagcaggacggagccgtggaaaat
cgtaagaaagctaaagcacaggatggcgctgcgatggaaatgcaacctctgaacagtgat
gagggagccgatgcagaggataagaagaaggccaacctgccaaagaaagagaagtctgtc
ctacagggcaagctgaccaaactagccgtacagattggcaaagcaggattggttatgtcg
gccatcactgttatcatcctggtggtgctgtttgtagtagacaccttctggatccagaat
ctgccctggatcaaggagtgcacacccatttacattcagttctttgtgaaattcttcatc
attggcgtcactgtgctggtggtagctgttcctgagggcctcccgcttgctgtaacaatc
tccctggcatattctgttaagaaaatgatgaaagataacaacctggtgcgtcacttagat
gcctgtgagactatgggcaatgctactgccatctgctctgacaagactgggacgctgacc
atgaaccgcatgactgtggtgcaagccttcatggctgaaaagcactacaggaaggtccct
gaaccagagagcgtcccttcctccattttagacatgttgattctgggcatagcagtcaac
tgcgcctacactactaagatcatgcctccagagaaagaagggggcctgcctcgccaggtg
gggaacaagaccgaatgtgccttgctgggcttttctgttgacctgaagcgtgactaccaa
actatacgcaacgaaatccctgaagaaaaactttacaaggtctacaccttcaactcagtc
cgcaagtctatgagcactgtgttgaagatggccgatggcagctaccgtatgttcagcaaa
ggggcctcagaaatcctcctaaaaaagtgctataaaatcatgacagcaaacggtgagtca
aaggtctttcggccacgggaccgagatgacatggcgaagaaagtgattgagcccatggct
tcagagggcctgaggaccatctgccttgcatacagagatttccctgtctctgacggtgag
cctgactgggacaacgaaaatgacatcctctctggactgacctgcctctgtgtggtgggc
attgaagatcctgtgagacccgaggtcccagatgctatcaggaaatgtcagcgtgctggc
atcacagtgcggatggtgactggggacaacatcaatacagctcgagccattgccaccaag
tgtggcatcctactgcctggagatgacttcatctgcctggaggggaaagagttcaaccga
aggatacgaaatgaaaaaggagagattgaacaagaacgcattgacaagatctggcccaaa
ttacgagtactggctcgctcttcccctacagacaaacacactctagtcaaaggtattatt
gacagtacagtgatagaacagagacaagtagtagcagtgacaggagacggtactaatgat
ggccctgctttgaagaaagctgatgttggctttgccatgggtattgccggcacagatgtt
gctaaggaggcttctgacatcattctgactgacgacaacttttccagcatcgtcaaagcc
gtcatgtggggacgcaacgtctacgacagcatctccaagttccttcagtttcagctaact
gtcaatgtggtggctgtcatcgtagcatttacaggagcctgcatcacacaggactctcca
ctgaaagctgtacagatgttatgggtcaacctgatcatggacacatttgcttcactagcc
ctggccactgagcccccaacagaagccttgctgctaaggaagccatatggccgcaacaag
cctctcatttctcgcactatgatgaagaacatcctgggccagggagtgtaccagctagtt
atcatcttctcgctgctctttgctggggagaaagtgtttgacattgacagcggcaggaat
acacccctccacgccccgccttctgaacactacaccattgtcttcaatacttttgtactg
atgcagcttttcaacgagatcaatgcccgcaagatccacggtgaaaggaatgtctttgaa
ggcatcttcaacaaccttatcttctgtagtattgtctttggtaccttcattatccagatc
gttatagtgcagtttggagggaagccattcagctgtgtggctctgaccattgaccagtgg
ctgtggtgcactttcctgggctttggctctctactatggggacaggtaatctcttcgata
cccaccagccgcttaaaattcttgaaaacggcgggccacggcacccagaaagaggagatc
ccggatgaggagctggaggagctggatgacatggatgaaatcgaccacgccgagcgggaa
cttcgtcgcggccagatcctctggttccgaggcctcaatcgcatccagactcagatccgg
gtggtgaatgcattccgcagctccatctccctctatgaggggctggagaagcccgagtcg
cgatcatcaatccacaacttcatgacccaccctgaatttcggatagaggactctgagccc
catattcccctcatagacgacaccgacgcagaggacgacgctcccaccaagcgcaattcc
gccagcccccgcaacacctcgcccacgccgccctcgcccgctaccgccgcccctcccacc
gcaccggtctctccctccctaaaccagaacaataatgctgtggagagcagtaaccacctc
ctcccagagggcaccaaatcaggaaccccctcggccccggggagccctttacacagcctg
gagacctccctttga
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