| Entry |
|
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| Symbol |
samm50l
|
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| Name |
(RefSeq) sorting and assembly machinery component 50 homolog B
|
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| KO |
| K07277 | outer membrane protein insertion porin family |
|
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| Organism |
ssco Scomber scombrus (Atlantic mackerel)
|
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| Pathway |
|
|---|
| Brite |
Mitochondrial biogenesis [BR:ssco03029]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
134004670 (samm50l)
Transporters [BR:ssco02000]
Other transporters
Pores ion channels [TC:1]
134004670 (samm50l)
|
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| SSDB |
|
|---|
| Motif |
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| Other DBs |
|
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| LinkDB |
|
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| Position |
22:3827729..3836074
|
|---|
| AA seq |
470 aa
MGTVHAKSLDPVPMHGRDLGVHPDDFVDTPEPEHEAKQEILENKDVIVQHVNIQGLGRTK
EDLLGYEISDVFHARNLIDVMKKAHLARQKLLRLGIFKEVEVLIDTSEGADALPNGLDVT
FEVTEVKRLTGSYNTMVGNNEGSMVLGLKLPNMLGRAEKLTFQFSYGTKETSYGLSFFKP
QPGHFERNFTLNAYKVTGQFPWSSLKETDRGLSGELNFPLGMTNHTLKWEGVWRELGCLA
RSASFAVREESGHSLKSALSHTVSVDSRNSAIFPSRGALLRINQELAGYTGGDASFLKED
FELQLNRRLFFDSVLSASLWGGMLYPIGGQQSCIADRFYLGGPTSVRGFGMYSIGPQSEG
DYLGGEAYWAGGLHLYTPLPFRPGKGGFGDLFRTHFFLNAGNLCNLNYGEGPRAHLQKLA
ECIRWSYGAGIVLRLGNIARLELNYCVPMGVQSGDRICDGVQFGAGIRFL |
|---|
| NT seq |
1413 nt +upstreamnt +downstreamnt
atggggactgtccatgctaagagtctggatcctgtcccgatgcacggcagagacctgggc
gtccaccccgatgacttcgtggatactccggagccggagcacgaggccaagcaggagatc
ctggaaaacaaagatgtgatcgtccaacatgtgaacatccagggtctgggcaggactaaa
gaggatctgctgggctacgagatctctgatgttttccacgccagaaacctcatcgatgtg
atgaaaaaggctcacctggccagacagaagctgctccgcctggggatcttcaaagaggtg
gaggtgcttattgacacctctgaaggtgcggacgctctgcccaacggtctggacgtcact
tttgaggtgacagaggtaaagagactgacaggaagctacaacaccatggtcggcaataat
gaaggaagcatggtgctgggtctgaagctgcccaacatgctgggccgagccgagaaactc
accttccagttctcctacgggacaaaggagacgtcctacggtctttccttcttcaagccc
cagcccggacactttgaacgcaacttcactctaaacgcgtacaaagtcaccggccagttt
ccatggagctccttaaaagagactgacagaggcttgtctggagaactaaactttcctctg
gggatgaccaaccacacgctgaagtgggagggtgtatggagggagctgggctgtctggca
cgcagcgcttccttcgccgtgcgagaggagagcggacactcgctgaaatctgccctctcg
cacactgtgtccgtcgattcaaggaattctgccatcttccccagcagaggtgccttactg
cggatcaaccaggagctggccgggtacacaggaggagatgccagcttcttgaaagaggat
tttgagctgcagctcaacagacggctcttctttgactcagtcttgtctgcatctctgtgg
ggtggaatgctttatcccattggaggacagcagtcctgcatcgctgacaggttttatctc
ggaggtcccaccagtgtacgaggatttgggatgtacagcatcggtccacagagtgaaggg
gactacctgggtggagaggcgtactgggcaggcggtctacacctctacacccctctaccc
ttccgaccagggaaaggcggtttcggagaccttttcagaacacacttcttcctcaacgcc
ggcaacctgtgcaatctcaactacggtgaaggtccccgggctcatcttcagaagctggct
gagtgtatccgctggtcatacggagctggtatcgtgctgcgcctaggaaacatcgcaaga
ctggaactgaactactgcgtgcccatgggagttcagagtggagacaggatatgtgacggt
gtccagtttggagcaggaatccgcttcctgtga |
|---|
