Scomber scombrus (Atlantic mackerel): 134004763
Help
Entry
134004763 CDS
T10651
Name
(RefSeq) peroxisome proliferator-activated receptor alpha-like isoform X1
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03320
PPAR signaling pathway
ssco04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
134004763
03320 PPAR signaling pathway
134004763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
134004763
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ssco03310
]
134004763
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
134004763
Nuclear receptors [BR:
ssco03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
134004763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
mRNA_decap_C
Motif
Other DBs
NCBI-GeneID:
134004763
NCBI-ProteinID:
XP_062300132
LinkDB
All DBs
Position
22:9626299..9638650
Genome browser
AA seq
478 aa
AA seq
DB search
MAGDLYCPPSPLGDSLLDSPLCGDLMEDLRDISQSIGGDTLGFDFPEYQSTCSGSENSIT
LDTLTPASSPSSGGCGAAIGPEEKFSPLSLECRVCSDKASGFHYGVHACEGCKGFFRRTI
RLKLEYDKCERNCKIQKKNRNKCQYCRFHKCISVGMSHNAIRFGRMPQAEKLKLKAESKM
VEKEEASPMLSDHKFLVKQIHEAYMSNFNMNKAKARLILTGKTSKPQPFIIHDMETFQLA
EKTLAAHMVNSDYLESGSGLQAGDVVTALGCGELQQREAEARLFHCCQSTSVETVTELTE
FAKAVPGFQSLDLNDQVTLLKYGVYEALFTLLASCMNKDGLLVARGRGFITREFLKSLRR
PFSDMMEPKFQFATRFNSLELDDSDLALFVAAIICCGDRPGLVDVPLVEQLQESIIQALQ
LHLLANHPDNTFLFPRLLQKLADLRELVTEHAQLVQEIKTTEDTSLHPLLQEIYRDMY
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggcaggggatctctactgccccccatccccgctgggggattccctcctagacagcccg
ctgtgtggagacctgatggaggatcttcgtgacatctcgcagtccataggaggagacaca
ctgggatttgatttcccggagtaccagagcacttgctcaggttcggagaactccatcaca
ctggacaccttgaccccggcctctagtccgtcgtcaggggggtgcggagcagcgataggc
cctgaggagaaattcagccccctcagcctggagtgcagagtatgctcagacaaagcgtca
ggcttccactatggggtgcatgcctgtgaaggctgtaagggtttcttcaggaggaccatc
cggctaaagctggagtatgacaagtgtgaacgtaactgtaaaatccaaaagaagaaccgc
aacaagtgccagtactgccgattccacaagtgcatctctgtgggcatgtcccacaacgcc
atccggtttgggcggatgcctcaggcggagaagctgaagctcaaggcggaaagcaagatg
gtggagaaagaggaggcgagccccatgctgtccgaccacaagtttctggtgaagcagatc
catgaagcctacatgagtaacttcaacatgaacaaggcgaaagctcggctcatactcacc
ggaaagactagcaagccgcagccgttcatcatccacgacatggagacgttccagctagcg
gagaagactttagcggcccatatggtaaacagtgactatttggagtccggcagcggcctt
caagctggggatgtagttacagctttggggtgtggggagctccagcagagggaggctgaa
gcgaggctcttccactgctgccagagcacctctgtggagactgtcacagagctgacggag
ttcgccaaggcggtgccgggtttccagagcctggatttaaacgatcaagtgactctcttg
aagtatggcgtttatgaagctctcttcaccctcctggcctcctgcatgaacaaagacggc
ctcctggtggcgcgtggcagaggtttcatcacccgtgagttcctcaagagcctccggcgg
ccatttagtgacatgatggagcccaagttccagtttgccacgcgcttcaactccctggag
cttgacgacagcgacctggccctttttgtggctgccattatctgctgcggagaccgtcca
ggcctggtggatgtgcctcttgtggagcagctgcaggagagcatcatccaggcgctacag
ctccacctgctggccaaccacccagacaacactttcctcttccccagactgttgcagaaa
cttgctgacctccgtgaactggttacggagcacgctcagttggtccaggaaatcaagacg
acagaagacacgtcactgcacccgctcctgcaagagatatacagggacatgtactga
DBGET
integrated database retrieval system
