Scomber scombrus (Atlantic mackerel): 134004797
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Entry
134004797 CDS
T10651
Symbol
recql
Name
(RefSeq) ATP-dependent DNA helicase Q1
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssco03400
]
134004797 (recql)
Enzymes [BR:
ssco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
134004797 (recql)
DNA repair and recombination proteins [BR:
ssco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
134004797 (recql)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
RQC
wHTH-PRTase_assc
Motif
Other DBs
NCBI-GeneID:
134004797
NCBI-ProteinID:
XP_062300177
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All DBs
Position
22:1979063..1994542
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AA seq
903 aa
AA seq
DB search
MDCGGGNNDVQAELDSVEAELDLVELQIGDLLQKQSELTARKNALLCQLEEACDAAHPSA
SSSSSSSSSKASGDVSVMSKQEMQRYDGADFEWSKDVEQHLKDSFHLSKFRPLQLRAINL
TLAGRDLFLVMPTGRGKSLCYQLPAVCSKGVTLVITPLLSLMEDQVMFLKSIDVSAVMLN
SSSSKEHAKTVLAGLTDPKASFKLLYVTPEKIAKSKLLMSRLEKAYNANLLSRIAVDEVH
CCSQWGHDFRPDYKLLGILKRQFPKVPLLGLTATATSSVLKDCEKILCVSQPIVLTASFN
RTNLHYEVRIKDSDNEASINDIASTIKNRYKDQSGIVYVFSQKDAESVASELQNRDILAY
PYHAHMDPVDKSRVHRKWTAGKIQVVVATVAFGMGIDKSNVRFVIHHTISKSIENYYQES
GRAGRDDRPADCIVYYGFSDIFRISTMVVMESVGQQKLLLMVDYCQNVDRCRRSIMAVHF
DEVWDNKGCNQMCDVCRNQKDFSTMDITQHARQVVQIIEVASSMDEKLTPLKLVEAWMGK
GPAKRRKLIETTTLSRQQVEAVIVYLLVKGYLKEDFSFTPYTTYIYMKLGHKAPLLKSQT
HTLSMKMKMKTTESGSAVLRVPRTKPKRERDQFKVLEMPLCPRKSRKTRKTSHSLPPPPP
TPPRGQAAKETSAVKANEEEVDITFDPVVMDNSCPPQPKQKLFKEQRNLSRKQDSETDTW
AERIKKQLADRHGEEEEGKKKRPIMPQHVVHVDVEINTVDNVGVCDGEETPAHPVKPCSK
RKSTTPQRARRKPRAHAAAPDVPSQSPGCDTATNTAPSSPSQASIMSETAAEELCHLRNY
YSKQLRRINYISHEYLGQPAQPGVLACIREPLRSLRLPSRVTISQTARSLWTRVSGRRKL
VHR
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggactgtgggggaggaaataatgatgtgcaggcagagctggactcagtggaggcagag
ctggacttggtggagctgcagattggggatctcctgcagaagcagtctgagctgactgca
cgtaagaacgcactgttgtgccagctggaggaagcctgcgacgccgcacatccgtctgca
tcctcctcttcatcctcctcttcctccaaagcatctggagatgtttctgtgatgagcaag
caggagatgcagcgctatgatggagcagattttgagtggtccaaagacgtggagcagcat
ctgaaggattcattccatctgtccaagttcagacctctgcagctcagagccatcaacctg
acactggcaggcagagatctgttcctggtgatgcccacaggccgaggaaagagtctctgc
taccagctgcctgctgtctgctccaagggtgtcactctggttatcactcctctgctgtct
ctgatggaggatcaggtcatgtttctgaagtccatcgatgtgtcagcagtcatgttgaat
tcttctagcagcaaggaacacgctaagacagttttggcggggttgactgatccaaaggcc
tccttcaagctgttgtatgtgactccagagaagatcgccaagagcaagctgctgatgtct
cgtctggagaaagcctacaacgcaaacctgctgagtcgtatcgctgtggacgaggtgcac
tgctgcagccaatggggacacgacttcagaccagattataagctgctgggcatcctgaag
agacagttccctaaggttcctctgctgggactcacagccacggcaaccagcagcgttctc
aaagactgtgagaagatcctgtgtgtatcacagccaatcgtactcaccgcctccttcaac
agaaccaacctccactacgaggttcgtattaaagattctgacaatgaagcatcaataaat
gacatcgcctccacgattaaaaacagatacaaggaccagtcaggaattgtgtacgtgttc
tctcagaaggacgctgagtcagttgcgtctgaactacagaacagagacatcctggcttat
ccgtaccacgctcacatggatcctgtagacaagtcccgagttcaccgcaaatggacagct
gggaaaatccaggtggtggtagcaactgtggcgtttggaatgggcatcgacaagtctaac
gtgaggtttgtcatccatcacaccatcagcaagtccatagagaactactaccaagagagt
ggacgagcaggcagagacgaccgtcctgcagactgcatcgtgtactacggcttctcagac
atcttcaggatcagcacaatggtggtgatggagagcgttggccaacagaagctgctgctg
atggtcgactactgccagaatgttgacaggtgtcggcgctccatcatggccgttcatttt
gacgaggtgtgggacaataaaggatgcaaccagatgtgtgatgtttgccgcaatcaaaaa
gacttctccactatggacatcacccagcatgccaggcaggtggtgcagattattgaggtt
gcttcctccatggatgagaagttgacccctctgaagctggtggaggcgtggatggggaag
ggccccgccaagcgcaggaagttgattgagaccaccacgctgtctcgacagcaggttgaa
gctgtgatagtttacctgctggtgaagggatacctcaaagaggatttcagcttcactcct
tacaccacctacatctacatgaagctgggccacaaagcccccctgctgaagagccagact
cacacactcagcatgaagatgaagatgaagacaacagagagtggatctgccgtgctgcga
gtgccaagaacaaaaccaaagagggaaagagatcagttcaaagtgctggagatgcccctg
tgtccaagaaagtcaagaaagacaagaaagacctcccatagtctcccccccccccctcca
accccacccagaggacaagctgccaaagagacatctgcagtcaaggccaatgaggaggag
gttgatataacctttgaccccgttgtcatggacaacagttgtcccccacaacccaaacag
aaactatttaaagaacagaggaacctgtccaggaaacaggacagtgagacagatacatgg
gcagagaggataaagaaacagctggcagacagacatggagaggaggaggaggggaagaag
aagagacccatcatgccccaacatgtagtgcatgtggatgttgaaattaacacagtagat
aatgtaggtgtgtgtgatggtgaggagacaccagcacatccagttaaaccttgttctaaa
cgtaaatccaccacccctcagagagcgaggaggaaaccccgcgcacatgcagctgcgcca
gatgttccctctcagtctccaggctgcgacacagccaccaacaccgcgcccagctctcca
tcccaggcctccatcatgtctgagactgcagccgaggagctctgccacctgaggaactac
tacagcaagcagctcaggagaatcaactacatatcccatgaatacctggggcagcctgca
cagcctggggtgctggcatgcatcagggagcctctgaggagcctccgtctgcccagcagg
gtgaccatctcccagacggctcgcagcctatggacacgagtcagcgggaggaggaagctg
gtccatcgatga
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