Scomber scombrus (Atlantic mackerel): 134004835
Help
Entry
134004835 CDS
T10651
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssco03041
]
134004835
Spliceosome [BR:
ssco03041
]
Common components
Common spliceosomal components
General mRNP proteins
134004835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RBD_DEAH11
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
134004835
NCBI-ProteinID:
XP_062300217
LinkDB
All DBs
Position
3:35604866..35617306
Genome browser
AA seq
491 aa
AA seq
DB search
MADDLDIEAMLEAPYRKDDAKNPNPNGQEEHSKSRKKRSRSRERKTSRSRERKRSRERKR
SRSRERERRHSKSRERGGRYREHHKHRKQSRSKSPVKKEKSPIRQPIDNLTPEERDARTV
FCMQLAARIRPRDLEEFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVETNSVPLAIGLTG
QRLLGVPIMVQASQAEKNRAAAAAAANNLQKGSSGPMRLYIGSLHFNITEDMLRGIFEPF
GRIESIQLMMDSDSGLSKGYGFITFADAECAKKALEQLNGFELAGRPMKVGHVTERTDAS
NASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGVIAMGAMAAV
SAAMNPGLNMNSAGLNHPSHPLATHCFQLSNMFTNSEDHPGWEGDIQHDVIEECNKHGGV
VHIYVDRNSTEGNVYVKCPSVQAAMAAVSALHGRYFAGKVITAAFVPLLAYHQLFPESAS
ATQLLAPPQRR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgacctggacattgaggcgatgctggaggctccgtacaggaaggacgacgcc
aagaacccgaatcccaatgggcaggaggaacacagcaagagcaggaagaagcgcagccgc
agccgagaaaggaagacaagccgcagccgagaacgcaaacgcagccgagaaaggaagaga
agtcgcagccgagaacgagaacgtcgccacagcaagagccgagagaggggggggcgctac
agggagcaccacaaacaccgtaagcagtcgaggagtaagagtcctgtcaagaaggaaaag
agtccaatcaggcagccgatagacaacctgactccagaggagcgcgatgccaggacggtg
ttctgcatgcagctggctgccaggatccgacccagagacctggaggagttcttctctgcg
gtgggaaaggtgcgggatgtgaggatgatctcagacaggaactcacggaggtcaaagggc
atcgcttacatcgagtttgtggagaccaactctgtccctctggccatcgggctgacgggg
caaaggctgctgggagttcccatcatggtgcaggcctcacaggcagagaagaacagagca
gctgcagcagcagcagccaacaacctgcagaaaggctcatctggacccatgaggctctac
atcggatctctgcacttcaacatcaccgaggacatgctgagaggaatctttgagccgttt
ggacggattgagagcatccagctgatgatggacagtgactctggactctccaaaggatac
ggcttcatcacatttgcagatgcagagtgtgctaagaaagctctggagcagctgaacggc
ttcgagttggcgggtcggcccatgaaggtgggtcatgtgacggagcggaccgacgcatcc
aacgcctcgtctttcctcgacagcgacgaactcgaacgcaccggcatcgacctcgggacc
accggacggctgcagctcatggcccgactcgctgagggtacaggtctacagatccctcct
gcagctcagcaggctctgcagatgagcggagtgatcgctatgggagccatggctgctgta
tcagctgctatgaatccaggtctcaacatgaactctgcaggtctgaatcatccgtctcat
ccgctggcaacacactgtttccagctgtccaacatgttcaccaacagtgaggaccatcct
gggtgggagggggacattcagcatgatgtcatcgaggaatgcaacaaacatggaggcgtc
gttcacatctacgtcgaccggaactccaccgagggtaacgtgtatgttaagtgtccatcg
gtccaagctgcgatggctgccgtcagcgctctgcacgggagatactttgcaggtaaggtg
atcacggcggcgttcgtccccctgcttgcttaccatcagctgttcccggagtccgccagc
gccactcagctgctggccccgccccagcgccgatga
DBGET
integrated database retrieval system
