Scomber scombrus (Atlantic mackerel): 134005421
Help
Entry
134005421 CDS
T10651
Symbol
rab1ba
Name
(RefSeq) zRAB1B, member RAS oncogene family a
KO
K07874
Ras-related protein Rab-1A
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134005421 (rab1ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
134005421 (rab1ba)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
134005421 (rab1ba)
04031 GTP-binding proteins [BR:
ssco04031
]
134005421 (rab1ba)
Membrane trafficking [BR:
ssco04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab GTPases
134005421 (rab1ba)
Autophagy
Other autophagy associated proteins
134005421 (rab1ba)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134005421 (rab1ba)
Exosomal proteins of other body fluids (saliva and urine)
134005421 (rab1ba)
Exosomal proteins of colorectal cancer cells
134005421 (rab1ba)
GTP-binding proteins [BR:
ssco04031
]
Small (monomeric) G-proteins
Rab Family
Rab1/35 [OT]
134005421 (rab1ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
RsgA_GTPase
Gtr1_RagA
SRPRB
FeoB_N
AAA
AAA_7
ABC_tran
PduV-EutP
AAA_29
AAA_16
LANC_like
AAA_22
Septin
AAA_5
CRAL_TRIO_2
Dioxygenase_N
TniB
Motif
Other DBs
NCBI-GeneID:
134005421
NCBI-ProteinID:
XP_062300297
LinkDB
All DBs
Position
23:complement(22744812..22753655)
Genome browser
AA seq
201 aa
AA seq
DB search
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLQEIDRYASENVNKLLVG
NKCDLTTKKVVDYTTAKEFADSLAIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAG
GDKPNLKIESTPVRQSGGGCC
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccgaatatgactatctgttcaagctcctgctcatcggagactctggagtagga
aagtcctgccttctgctccgctttgctgatgacacctacacagagagctacatcagcacc
atcggagtggacttcaagatccgcaccatcgagctggacggcaagaccatcaaactgcag
atttgggacactgcaggtcaggagaggtttcgtaccatcacctccagttactaccgcgga
gctcacggcatcatagttgtatatgatgtgacagatcaggagtcttataacaatgtgaag
cagtggctgcaggaaatcgaccgctacgccagtgaaaatgtcaacaagcttctggtgggc
aacaagtgtgacctgaccaccaagaaagttgtggactacacaacagctaaggaatttgct
gactctctggccatccccttcctggagaccagcgccaagaacgccaccaacgtagagcag
gccttcatgaccatggcagccgagatcaagaagcgcatgggccccggagccacagccggc
ggagacaagcccaacttaaaaatcgagagcacccccgtcaggcagtctggagggggctgc
tgctaa
DBGET
integrated database retrieval system
