Scomber scombrus (Atlantic mackerel): 134005444
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Entry
134005444 CDS
T10651
Name
(RefSeq) multiple PDZ domain protein
KO
K06095
multiple PDZ domain protein
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04530
Tight junction
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134005444
NCBI-ProteinID:
XP_062300323
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Position
23:13925929..13968419
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AA seq
2130 aa
AA seq
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MIETMDTQRALQAVERLQAKLKERGEVPTEEKLSLLKSVLQSPLFHQILALQKSVQHLKD
QGSVPSSRGSDLGDHITAVKPNGGHVSYSDVSAATHINGKASSEEFDHIINAMAQGRYVT
NVELQKPVSGGLGFSVVGLKSENRGELGIFIQEIQPGSVAHCDGKLKEADQILSINGQAL
DQTVTHQQAIGILQSASERVQLTVARGPIPQLASPVVSRTPSAASTLSANSSAWQHVETI
ELVNDGTGLGFGIVGGKTTGVIVKTILPGGIADQDGHLRSGDHILRIGDTDLYGMGSEQV
AQVLRQCGNRVKLVVTRGPVDENPTVSSVMPVVLPTVNEQQDYEEEESEAFDVSLTKNAQ
GLGITIAGYVGDKNSEPSGIFVKSITTESAVDQDGRVHVGDQIIAVDGVNIQGYTNQQAV
EVLRHTGQTVHLKLIRRGFRPDEIPPAVSPSVTILPPCTTIPTTTTVLTELELERKAEEA
AQVAADEKQLQTKGEGSDVSPATDQLTEDKHGMKLTPFEEEELMKKWQEILGPSNEVVVA
QVEKFSENSGLGISLEANSGHHYIRSVLPEGPVGRCGKLFSGDELVEVNGISLIGETHKE
VVKILKELPLSVYMTCCRPAPHLQADIDAVQPEAEALSTVSILKKQIDLSSVLVDEDTEV
KAAAAAQDNVTEEAIGSPLAMWELEIQNIELEKGEGGLGFSILDYQDPLDPIKTVIVIRS
LVPSGVAEQDGRLLPGDRLMYVNTTNLENASLEDAVQALKGAKLGKVQIGVAKPLPGICG
YSHSPHPYGEQEITSSSTIHSFDFNNILVEEGEEEGLTEGIVYRAEPALIDTTEGDLSDE
KVLEHCYSGIEDDTFQASMIALNGSSCSTDLDFLHSSTPKLTARLELLDEHPLFTTTLPG
LADNTQQFSPEKPASFTPPRDRATAFNAVLSSSDRFLAQQSTKEETVDCSNTYSPFAEIE
TRSNVQEETAESLHFQKEPAISFGDIQILMKDEEARVKDSAEDGDKEALTSGSNFERTIT
VVKGNSSLGMTVCAMKDGLGMLIRSVINGGSINRDGRLGVGDLILAINGEPTANMTNAQA
RAMLRRHSLIGPDLGSACAPEDDLCPFYVITYVPAEYLEEYKASLEQEKDDIFSEAAPVP
IPRDIPNLPEREDGEGEESASYSNWNQPRKVELFREPGKSLGISIVGGRGMGSRLNNGEV
QRGIFIKHILDDSPAGHNGTLKTGDRIVEVDGVDLRDASHEEAVEAIRRAGNPVSFLVQS
IIHRPRPESIYCPSPPPAVETHSSTFTCMPHRTSQSSITDSGEERAATKDNKDKEGDSHS
KLFLRLFPTNPFTPTPFKPAKREAAKASPTSSVLLPVVPHVGETDTDTLTETPGRPAEAE
EVKEEEEEVEVDEFGYNWKNIIQRYGSLPGVLHIIELEKGKTGLGLSLAGNRDRSRMSVF
VVGIDPSGAAGRDGRMVVGDELLEINGQVLYGHSHQNASSIIKSSPSKVKIIFVRNTEAL
NQMAVGPVREHEGDTVEPHTEQETTAANGDDDTSKHVIKLKDDGGLGVTFVEGNTESGVE
IQSISEVQGHTGKEGCMKPGDKLLSINGESVLGYTVEKVNSVLRKAKGPLKLTFSSNETS
SSFISPQSTCQDRANSEEVLASLPSMPSAAMATMSQPEVEAVTSLSRSSTPSTLASDPAT
CPIIPGCETTIDISKGRTGLGLSIVGGCDTLLGAIIIHEVYEEGAASKDGRLWAGDQILE
VNGIDLRAATHDEAINVLRQTPQKVRLAVYRDEAQYKEEDLWDSFTVELHKNPGQGLGLS
IVGRRSRDQRNDTGVFVSDIVKGGLVETDGRLMQGDQILSVNGEDVRSATQEAVAALLKC
CIGPITMEVGRFKAGPFHSERRLSQSSQMSETGSSKVTPQSCSDAANVPGDPDNLSSSQE
PPEYQDTRIVEFTKGPNDSLGISIAGGVGSPLGDIPIFIAMMNPVGLAAQTQKLKIGDRI
VSICGTSAEGMTHSQAVTLLKNATGTIQLQVVAGGDTTVTGPPDQATGGLTPSCIFQDDL
GPPQYKTIILERGPDGLGFSIVGGYGSPHGDLPIYVKTVFGKGAAAEDGRLKRGDQIMAV
NGQTLEGVTHEEAVGILKRTKGNVTLTVLS
NT seq
6393 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaacaatggatacacaacgtgccttgcaggcggtggagcgtctccaggccaaa
ctgaaggaaaggggggaggtgcccaccgaagagaagctcagcctgctcaaatcggtgctc
cagagccccctcttccaccagatcctggccttgcagaagtccgtccagcatctcaaggac
caggggagcgtcccgtcatcacgggggagtgaccttggtgatcatatcactgcagtcaag
cccaacggtggccatgtttcctactcagacgtctcagctgctacacacatcaatggcaag
gcatcatctgaagaatttgatcatattattaacgccatggcacaggggcgctacgtgaca
aacgtggagctgcagaagccagtgtcaggaggtctgggcttcagcgtggtgggcctgaag
agcgagaaccgcggcgagctcggcatctttattcaggaaattcaaccaggaagtgtggct
cactgtgacgggaagctcaaagaagcagaccagattttgtccatcaatggccaggccctg
gaccagacagtgacccaccagcaggctataggcatcctgcagagtgcttcggagagggtg
caactcacagtagctagagggccaatacctcagctggccagtcctgtggtgtcccgaaca
ccctctgctgccagtacactgtcggccaactctagcgcgtggcagcatgtggagaccatt
gagctggtcaacgatggcactggcctgggctttggcattgtgggaggaaagaccaccggc
gttattgtcaaaactatccttcctggaggcatagcagatcaggatggccacctgcgcagt
ggggaccacatcctgagaattggagacactgacctgtatggcatgggcagtgagcaggtg
gcgcaggtcctcaggcagtgtggtaacagggtgaagctggtggttaccaggggtcctgta
gatgagaatcccactgtctcttctgtcatgccagtggtactccccactgtcaacgagcaa
caggactacgaggaagaggagtctgaggcgtttgatgtgagccttaccaagaacgcccag
ggacttggaatcactattgctggctatgttggagataaaaattcagagccctctggtatt
tttgttaagagcataacaacagaaagcgctgtggatcaagatggccgtgttcatgtggga
gaccagataatagctgtcgatggtgttaacatccagggatacaccaatcaacaggcagtg
gaagtcctccgacacacaggccagacagtccaccttaagctgatccggcggggtttcagg
cctgacgagatcccccctgctgtgtcccccagtgtcaccatcctgcccccttgcaccacc
atccccaccacaaccactgtcttgacggagctcgagctggagaggaaggctgaggaggct
gctcaagtcgccgcagatgaaaagcagctccagacaaagggtgaaggatctgatgtcagt
ccagccacggatcagctaacagaagacaaacatgggatgaagctaacaccgtttgaggaa
gaagaactaatgaagaagtggcaggagattctgggtccaagtaatgaagttgtagtggct
caggtggagaaatttagtgagaacagtggcctggggatcagtctcgaagcaaacagcggg
catcattacatccgttctgttctacctgagggacctgttggtcgatgtggcaagctgttc
agtggagatgaactggttgaggtcaatggcatatccctgattggtgagacccacaaggaa
gttgtcaaaatcttgaaggagcttccactctctgtatacatgacatgctgtaggcctgct
cctcacctgcaggctgacatcgatgccgtacaaccagaagcagaggctttgtccacagtt
tctatattaaagaaacaaatagacctgagcagtgtactggttgatgaagacaccgaggtg
aaagcagcggcagcggcgcaggataatgtgactgaggaggcgataggatctcctttggcc
atgtgggagctggagatccagaatatcgaactagagaagggagaaggtggactgggattt
agcattctggactaccaggacccattggaccccatcaagacagtgatagtgattcgctcg
ctggttccctctggtgtggctgagcaggatggcagactgttaccaggagaccgactcatg
tatgtcaacaccactaacctggaaaacgccagcttggaagatgcagtccaggctctgaag
ggagctaagcttggaaaggtgcagataggagtcgccaaaccgctgcctggaatatgtgga
tattcccactctccacacccatatggtgagcaggaaataacttcatcatccaccatccat
tcatttgacttcaacaatattttggttgaagaaggagaggaagaaggactgactgagggc
atcgtttaccgagcagagcctgcattgattgacaccactgaaggagacctgtctgatgaa
aaggtgctagagcattgttactctgggatagaggatgacactttccaggcatcgatgatt
gctcttaatggaagcagctgtagcacagacctggatttcctgcactcctccacacctaag
ctgacagctcgactggaattgttggatgagcatcctctcttcacaacaacactgccaggc
ctcgcagacaacacacaacagttctctccggagaagccggcttcgttcactcctccgaga
gatcgcgccacggcttttaatgccgtactaagcagttcagatcggttcttggcacagcaa
tcgaccaaagaggagacagtggattgctcaaacacatacagtccattcgctgaaatagaa
accagatctaatgtccaggaggaaactgcggagtcgcttcattttcagaaggagccggcc
atctcttttggagatattcagattttgatgaaggacgaggaggctcgcgtgaaagactca
gcagaagatggagacaaggaagcgctgacctccgggagtaattttgaaaggactatcaca
gttgtcaagggcaactccagcctcgggatgacagtgtgcgccatgaaagatggtttgggg
atgctgatccgcagtgtaatcaacggtggctccattaatcgtgatggacgcctcggggtc
ggtgacctcatcctcgccatcaacggagagcccactgccaacatgaccaacgctcaggct
cgcgccatgcttagaagacactccctgatcggaccagacctgggatctgcttgtgcaccc
gaggacgatctgtgcccgttttatgtcattacatacgtcccagctgagtatctggaggag
tacaaggccagtttagagcaggagaaagatgacatcttctctgaagcagctccagtccca
atccctagagatattcctaacctccctgagcgggaagatggagagggagaggagagcgca
tcttacagcaactggaaccagcctagaaaagtggagctcttcagagagccaggcaagtcc
ctggggatcagtatcgtcgggggccgcgggatgggcagccggctgaacaacggagaggtt
cagaggggcatttttatcaagcacatccttgatgacagtcctgctggacacaacgggacc
ttgaagactggggacaggatcgtagaggtggacggagttgatctaagagatgccagtcat
gaggaggcagtggaggccatacgcagggcaggcaaccctgtctccttcttggtgcagagt
attatccacaggccgaggcctgagtcaatatattgcccatccccaccgcctgcagtagag
acgcacagcagcactttcacatgcatgccacatcgcacatcccagtcatcgataacagac
tccggcgaggagcgagctgcgacaaaggacaacaaggacaaggagggagacagtcacagt
aaacttttcctccgcctcttcccaactaaccctttcactcctaccccgtttaagccggcg
aagcgcgaagcggcaaaggcgtctcccaccagctctgtcctcctgccagtggtgccccat
gtgggagagactgatacagacacgctgacagagactcctggcagacctgctgaggcagag
gaggtgaaggaggaggaggaggaggtggaggtggatgagtttggatacaactggaagaac
ataatccagcgctatggcagccttccaggtgtcctacacataattgagctggaaaaaggc
aagacgggcctcggcctcagcctggcagggaacagagaccgctctcgcatgagtgtgttc
gtagtgggaatagaccccagcggggcggccggcagggacggacgcatggtggtgggggat
gagctgctggagattaatggtcaagtcctgtacggacacagtcaccaaaatgcatcttcc
atcatcaagagttctccatcaaaagtcaaaatcatctttgtcaggaacacggaggcgctg
aaccagatggctgtgggaccggtgagagaacacgagggagacacagtggagccccacact
gagcaagaaactacggctgctaacggtgacgatgacacttcgaaacatgtcataaagctg
aaggatgatggcggccttggcgtcacctttgtcgaggggaacactgagagtggagtggag
attcagagtatatctgaagtgcaaggacacacgggcaaagagggctgcatgaaacctgga
gacaaactcttatctattaatggtgaatcagtgctgggctacactgtggaaaaggtgaat
tctgtactgagaaaagccaaaggtccactgaagctaaccttctcttcaaatgagacctcc
tcctccttcatctctccccagtcaacctgccaggacagggccaactcggaagaagtcctt
gccagcctacccagcatgcctagcgctgccatggctaccatgagtcagccagaagtggaa
gcagtcacaagtctgagtcgctcttccaccccttccactctggcctctgacccggcgacc
tgtcccatcattcccggctgtgagaccaccatcgacatctccaagggccgcacaggcctg
ggtctcagcatcgtggggggctgtgacaccctgctgggggccatcattatccacgaggtt
tatgaagaaggggctgcctcaaaagatggcaggctgtgggcaggagaccaaatcctagag
gtgaatggcattgacttgcgcgctgccactcacgatgaagccatcaacgtgctgcggcag
accccgcagaaggtccggctggcggtctacagggacgaggcccagtacaaggaggaagac
ctgtgggactcattcactgtggagctgcacaagaacccgggccagggcctgggcctgagc
atcgtggggaggaggtcacgggatcagaggaatgacacaggagtgtttgtatctgacata
gtgaaaggaggtttggtggaaactgatggccgactgatgcagggcgaccagatcctctca
gtaaatggagaggacgtcaggtcggccactcaggaggccgtcgctgctcttctcaagtgc
tgcattgggcctataacaatggaggtggggaggtttaaagctggccctttccactctgaa
agaaggctgtcacaaagcagtcagatgagtgaaacaggcagctccaaagtgacccctcag
tcatgttcagatgctgcaaacgttcctggtgaccctgacaacctaagcagcagtcaggaa
cctccggagtatcaggacacgagaatagtggagttcactaaaggtcccaatgattctctg
ggtatcagtatagcaggtggggtgggcagccctttgggtgacatacccatttttatcgcc
atgatgaatcctgttggcctggctgctcagacccagaagctcaagattggggaccggatt
gtcagtatctgtggaacctctgctgagggcatgacccactcacaagctgtcactctgctc
aagaatgctacgggcacaatacagcttcaggtggtagcaggtggtgacaccactgtgacg
ggtccgccggatcaagcaactggaggtctcactcccagctgcatcttccaggatgacctc
ggcccacctcaatataagaccatcattcttgaaaggggaccagatggactgggtttcagt
atagttggagggtatggcagccctcatggagacctgccgatctacgttaaaactgttttt
ggaaagggggcagcagcagaggacggacgtctgaagcgaggagaccagataatggctgtt
aatgggcagactctggagggcgtcacacacgaagaggccgtcggcatcctgaaaaggacc
aaaggaaatgtcacgctgactgtgctttcatag
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