Scomber scombrus (Atlantic mackerel): 134005477
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Entry
134005477 CDS
T10651
Symbol
c1galt1lb
Name
(RefSeq) glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B
KO
K00731
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase [EC:
2.4.1.122
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00512
Mucin type O-glycan biosynthesis
ssco00514
Other types of O-glycan biosynthesis
ssco01100
Metabolic pathways
Brite
Enzymes [BR:
ssco01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.122 N-acetylgalactosaminide beta-1,3-galactosyltransferase
134005477 (c1galt1lb)
Glycosyltransferases [BR:
ssco01003
]
Glycan extension
Type 3 chain
134005477 (c1galt1lb)
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Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
134005477
NCBI-ProteinID:
XP_062300376
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Position
3:complement(16114107..16120317)
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AA seq
400 aa
AA seq
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MKALGSRFSFYAGFVVGTFTLYVFLRQVWFERTLSEQQTSGFEKLHDHQQQLEEERKIWK
KERSALFNLKHPHHTGEDSRMADELYKKVRILCWVMTGPNNLEKKARHVKSTWSRHCNVV
VFMSSVDDPDFPTVGLGTKEGRDQLYWKTIRAFHYAYEHHINEADWFLKADDDTYVIVDN
LRWVLANHTPDEPIYFGRRFKPYTKQGYMSGGAGYVLSKEALRRFVEGFKNKQCTHTTSV
EDLAMGQCMEKVGVLAGDSRDTVHRETFHPFVPEQHLTSKFPKSFWYWSYCYYPISEGPN
CCSDVSVSFHYVDASHMYLLEYYTYHLRAFGYRYRYQPTTPLGYNFEQLSSLDDAEGKKE
RASQEKGQVEGDNLSRTDKRKGADPPPAAGEGPPAAPAGK
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccctgggatctagattctcattttatgctggttttgtggtggggacctttaca
ctgtacgtgtttttgcggcaggtgtggtttgagaggactttatcagagcaacaaaccagc
ggctttgaaaaacttcatgaccaccagcaacagcttgaggaagagaggaagatatggaag
aaggagaggtctgctcttttcaacctgaaacaccctcatcatacaggtgaggacagccgt
atggctgatgaactttacaaaaaggtgcgtattctctgttgggtgatgacgggacccaac
aacttggagaagaaggctcggcatgttaagtccacatggagtcgccactgcaatgttgtg
gtcttcatgagctctgtggacgaccccgacttcccaacagtgggcctgggcaccaaggag
ggccgagaccaactgtactggaaaaccatacgggccttccattacgcttacgagcatcat
attaacgaagccgactggttcttgaaggcagatgacgacacctacgtaatagtagacaac
ttgcgttgggttcttgcaaaccacaccccagatgagcctatttattttggccgcaggttc
aagccctacaccaagcaaggctacatgagtggtggtgcgggctatgtgctgagcaaagag
gctctgcggcgatttgtagaaggatttaaaaacaaacagtgcactcacactacctctgta
gaggacctggcgatggggcagtgcatggaaaaagttggggtgctggcaggggactccaga
gacactgtgcaccgggagacatttcacccctttgtccctgagcagcatctcacttccaag
tttcccaagagcttttggtactggagctactgctactaccccatctcagagggtccaaac
tgctgctcagatgtgtcagtgtccttccactacgtagatgcttcacacatgtatttattg
gagtactacacttatcacctgcgtgcctttggctacagataccgttaccagcctaccacc
ccacttggctacaattttgagcagttgagctccttggatgacgctgaagggaaaaaagag
cgggcttctcaggaaaaagggcaagtagagggggacaatctgtccaggactgacaagaga
aagggtgcagatccccctcctgcagctggtgaaggcccccctgctgcaccagcaggaaaa
taa
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