Scomber scombrus (Atlantic mackerel): 134005487
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Entry
134005487 CDS
T10651
Symbol
mta2
Name
(RefSeq) metastasis-associated protein MTA2 isoform X1
KO
K11660
metastasis-associated protein MTA
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
134005487 (mta2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
134005487 (mta2)
03036 Chromosome and associated proteins [BR:
ssco03036
]
134005487 (mta2)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
134005487 (mta2)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
134005487 (mta2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTA_R1
BAH
ELM2
GATA
Myb_DNA-binding
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
134005487
NCBI-ProteinID:
XP_062300393
LinkDB
All DBs
Position
23:22562094..22593280
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AA seq
678 aa
AA seq
DB search
MAANMYRVGDYVYFENSSSNPYLIRRIEELNKTANGNVEAKVVCLFRRRDISGNLNTLAD
SNAREFEEESKQPSLAEQQKHQLKHRELFLSRQFESLPATHIRGKCNVTLLNETDVLAGY
LEKEDCFFYSLVFDPVQKTLLADQGEIRVGSKYQAEIPDKLAEGESDNRIQEKLETKVWD
PNNQLKDPQIDQFLVVARAVGTFARALDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQK
NNYDLAKAMSTLVPQGGPVLCRDEMEEWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSL
ASVVQFYYMWKTTDRYIQQKRLKAAEADSKLKQVYIPTYTKPNPNQIMVPGSKPGMNGAA
GFQKGLSCESCHSKYSQDLTREEGRYLSAAQSPQWYAWGPPNMQCRLCASCWIYWKKYGG
LKTPTQLEGAARAGSESGPRGHMTRQEVQGLSPFTRNEGRAKLLAKNRQTFILQTTKLTR
VARRVCEDILQPRRAARRPYASINANAVKAECMIRLPKATKTQVKTKVIPRPSLATIVKD
LAISAPLKLKASRGPPTPINRNQASQPRGAQSLLGKRGFDSATGVPYPANGRPYTSGMRT
TSQSVIKRQKVSQGEAPNPVVFVATKDTRALRKHLTQSEMRRAARKPHLPVRIKLPPPPR
SLVSLLPSSTSEPIVLED
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaacatgtaccgagtgggagattacgtgtactttgagaattcctccagcaac
ccttacctgatccgcagaatagaagagctcaacaaaacagccaatgggaacgtggaggcc
aaggtggtgtgtctgttcaggaggcgagatatctcaggcaacctcaacactctggctgac
agcaacgcaagagagttcgaggaggagtcgaagcagccgtcactggctgaacaacagaaa
caccagctcaaacacagagaactcttcctgtctcgacagtttgaatctctacctgccact
cacatacgggggaaatgtaatgtcaccctcctcaatgaaacagatgtcttggccggctac
ctagagaaagaggattgtttcttctactcgctggtgttcgacccggtgcagaagaccctg
ctggcagaccagggagagatccgggtgggttccaagtatcaggcagagatccctgacaag
ctagctgagggtgaatcagacaacaggatccaggagaagctggagactaaggtttgggac
cccaacaaccagctcaaagaccctcagatcgaccagttcctggtggtggcaagagctgtg
gggacattcgctcgtgccctggactgcagcagctccatccgccagcccagcctccacatg
agtgcagctgcagcttccagagatatcacactgttccacgctatggacacgttgcagaag
aacaactatgacctggccaaagccatgtccaccctggtgcctcagggggggccagtgctc
tgccgtgatgagatggaggagtggagcgcctccgaggccatgctgtttgaggaggctctg
gagaaatacggaaaagacttcaatgacatccgccaggactttctaccctggaagtctcta
gccagtgtggtccagttctactacatgtggaagactacagaccgctacatccaacagaaa
cgactaaaggcagcagaggcagacagcaagctgaagcaggtgtacatccccacttacacc
aaacccaaccccaatcaaatcatggttccgggcagcaagcctgggatgaacggagcagca
ggctttcagaaaggactcagctgtgagagctgccacagtaagtacagccaggatctgacc
agagaggaaggacgttatttgtcagcggcccagtcccctcagtggtacgcctggggccct
cccaacatgcagtgcagactgtgcgcctcctgctggatctactggaagaagtacggaggc
ctgaagacccccacacagctagagggcgccgctcgagctggctctgagtcagggccccgc
ggtcacatgacccgccaggaggtccagggcctgtcaccgttcacccgcaacgagggtcga
gccaagctgctggccaagaaccgccagacgttcatcctgcagaccaccaagctgacccgc
gtcgcccggcgggtgtgtgaggacatcctgcagccgcgccgtgctgccagacggccctac
gcctccatcaacgccaacgccgtcaaggctgagtgtatgatccggctgcccaaagctaca
aaaactcaagtaaagaccaaggtgatacctcgaccgtcactggccaccatagtgaaggat
ttagccatatctgctcctctgaaactgaaggcgtccagaggacccccgacacccatcaac
aggaaccaggccagccagcctcgtggggcccagagcctgctggggaagagaggcttcgac
agcgctacaggggtgccctacccagccaatgggaggccgtacacttcaggtatgaggacc
acctcccagtctgtcatcaagcggcagaaagtcagccagggggaggctcctaaccccgtg
gtgtttgtggccacaaaggacaccagggctctgaggaaacatctaacccagtcagagatg
cgtcgggcagccaggaaacctcacctcccagtccggatcaagctgccacctccccctcgt
tccctcgtgtccctgctcccctccagcaccagcgaacccatcgtcctggaggactga
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integrated database retrieval system
