Scomber scombrus (Atlantic mackerel): 134005489
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Entry
134005489 CDS
T10651
Symbol
eif4a1a
Name
(RefSeq) eukaryotic translation initiation factor 4A1A
KO
K03257
translation initiation factor 4A
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssco03019
]
134005489 (eif4a1a)
03012 Translation factors [BR:
ssco03012
]
134005489 (eif4a1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
134005489 (eif4a1a)
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
134005489 (eif4a1a)
mRNA cycle factors
Stress granule specific factors
134005489 (eif4a1a)
Translation factors [BR:
ssco03012
]
Eukaryotic type
Initiation factors
eIF-4
134005489 (eif4a1a)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134005489 (eif4a1a)
Exosomal proteins of bladder cancer cells
134005489 (eif4a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
UvrD-helicase
CMS1
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
134005489
NCBI-ProteinID:
XP_062300398
LinkDB
All DBs
Position
23:complement(24066242..24076614)
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AA seq
404 aa
AA seq
DB search
MSAEYDNRDNGPEGMEPDGIIESNWNQITDSFDEMNLREALLRGIYAYGFEKPSAIQQRA
IIPCIKGYDVIAQAQSGTGKTATFAISILQQIDVELKGTQALVLAPTRELAQQIQKVILA
LGDYMGASCYACIGGTSIRSEVQKLQAEAPHIVVGTPGRVFDMLTRKNLSSKYIKMFVLD
EADEMLSRGFKDQIYEIFQKLLSSTQVVLLSATMPADVLEVTKKFMREPIRILVKKEELT
LEGIRQFYINVEKEEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMQGRDFTVSAL
HGDMDQKERDLIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGR
GGRFGRKGVAINMVTEDDKRTLRDIETFYNTTIEEMPMNVADLI
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgaatatgataatagagacaatggcccagagggcatggagccagatgggatc
attgagagcaactggaaccagatcacggacagttttgatgagatgaacctgcgtgaggct
cttctcaggggaatttatgcctatggttttgagaagccttccgctatacagcagagagcc
attatcccttgtatcaagggttatgatgtgatcgctcaggcccagtctggcactgggaag
actgccacctttgccatttccatcctccagcagattgatgtggagttgaaaggtactcag
gctctggttctggcccccaccagggagctggctcagcagatccagaaggtgatactggcc
ctgggtgactacatgggagctagttgctacgcctgtattggagggaccagcatccgcagt
gaggtccagaagctgcaggctgaagcccctcacattgtggtgggaacccctggccgtgtc
ttcgacatgttgactcgcaaaaacctctcttcaaagtacatcaaaatgtttgtgctcgac
gaggctgatgagatgctcagtcgggggttcaaggaccagatctatgagatcttccagaaa
ctgttaagcagcacacaggtggtcctactctctgctaccatgccagccgatgttttggag
gtcacaaagaaattcatgcgtgaacctatccgaatcctggtaaagaaggaggaactgacc
cttgagggcattcgccagttctacatcaatgtggagaaagaggagtggaagctggacacg
ctgtgcgacctgtacgaaaccctgactatcacacaagctgtcatcttcattaacacgagg
aggaaagtggactggctcactgagaaaatgcaaggcagagatttcactgtctctgctctg
catggtgacatggaccagaaggagagagacttgatcatgagggagttccgctctggctcc
agtcgagtcctcatcaccactgatctgctggccagaggcattgatgtccagcaagtgtcc
ctagtcatcaactacgacctgccaaccaacagggaaaactacatccacaggattggtcgg
ggtggtcgttttggccgaaagggagtagccatcaacatggtgactgaggatgacaagcga
accctgagggacattgagacgttctacaacaccaccatcgaggagatgcccatgaatgtg
gccgatcttatctag
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