Scomber scombrus (Atlantic mackerel): 134005609
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Entry
134005609 CDS
T10651
Symbol
pax6b
Name
(RefSeq) paired box protein Pax-6b isoform X1
KO
K08031
paired box protein 6
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
134005609 (pax6b)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
134005609 (pax6b)
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Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_32
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
134005609
NCBI-ProteinID:
XP_062300556
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Position
1:complement(16898731..16912456)
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AA seq
439 aa
AA seq
DB search
MMQNKVYDICDEGHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHDE
VQVLDSEKVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVAKIAQYKRECPSIFA
WEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGTWGTR
PGWYPGTSVPGQPNQDGCQQQDGAGENTNSISSNGEDSEETQMRLQLKRKLQRNRTSFTQ
EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQAN
NSSSHIPISSSFSTSVYQAIPQPTTPVSFTSGSMLGRPDSALTNTYSALPPMPSFTMANN
LPMQPSQTSSYSCMLPTSPPVNGRSYDTYTPPHMQAHMNSQSMTTSGTTSTGLISPGVSV
PVQVPGSEPDMSQYWSRLQ
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagaacaaggtgtatgacatctgtgatgaaggtcacagtggcgtaaaccagctt
ggtggtgtgtttgttaatggtagaccgctgccggattccaccaggcagaaaatagttgaa
cttgctcacagtggtgctcgaccctgcgacatctccaggatactgcagacccatgatgaa
gtccaagtgctggacagtgaaaaggtatccaacggctgtgtgagcaagatcttgggaaga
tattatgaaacgggctccataagaccgagagcgataggcggcagcaagcccagagtcgcc
actccagaggtggtcgcgaaaatcgcgcagtacaagcgagagtgtccgtctatcttcgcg
tgggagatccgtgacagacttctgtcggaggggatctgcaccaacgacaatatacccagt
gtgtcatcgataaacagagtcctccgcaacctggctagtgaaaagcaacagatgggcgca
gatggcatgtatgacaagctgagaatgctcaacggtcagacaggaacttgggggacccgg
cccggctggtaccccggaacatcagtgccagggcagcccaaccaagatggttgccagcaa
caagacggtgcaggagaaaacacaaactcaatcagctcaaacggcgaggactcagaggag
acacagatgcggctgcagctaaagagaaagctacagagaaatcgcacgtccttcacacag
gagcaaattgaagcactggaaaaagaatttgaaagaacccattatccagatgtgtttgca
cgagagagactagcagcaaaaatcgacctgcccgaagcaagaatacaagtatggttctca
aacagaagagcaaagtggaggcgagaggagaagctgcggaaccagcgccggcaggccaac
aactcctccagtcacattcccatcagcagcagcttcagcaccagtgtctaccaggccatc
ccacagcccaccacaccggtgtctttcacctcggggtcaatgctgggtagacctgactca
gcactcacaaacacctacagtgcgctacccccaatgcccagcttcaccatggcaaacaat
ctacctatgcaacccagccagacctcctcttattcctgcatgctgcctaccagtccgcct
gtgaacgggcggagctacgacacatacacgccccctcatatgcaggcacatatgaacagc
caatcaatgaccacttctggtaccacctcaacaggactcatctctcctggagtgtctgtc
cctgtccaagtcccagggagcgagcctgacatgtctcagtattggtcaagactacagtag
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