Scomber scombrus (Atlantic mackerel): 134005633
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Entry
134005633 CDS
T10651
Symbol
rin1b
Name
(RefSeq) ras and Rab interactor 2
KO
K17638
Ras and Rab interactor 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
134005633 (rin1b)
Membrane trafficking [BR:
ssco04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
134005633 (rin1b)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
SH2
Motif
Other DBs
NCBI-GeneID:
134005633
NCBI-ProteinID:
XP_062300550
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All DBs
Position
23:9320187..9335775
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AA seq
794 aa
AA seq
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MQALASTQRGSPKAFSVLDRLLLTHPVWLQLSLNQDSALYILLREPVGTFLVRKCSSSQR
KVLCLRVTADRSSSCIKECFICEEDSTFALESSALSFPDLCRLVAFYCVSRDVLPFPLQL
PDAIAEATTHRQLEAISHMGQDFWSLPTASEIQNGPVDLDETTSGSQGQTAVNLLTQGRQ
GKLCFINPLFLQLEVSKPQLTNHSASNKRHRFKRSMRLRLSESSMNLSLEGVGSYSPPPS
VEHPGGSERLQKSGDNPQRRVHAGAGVLRRTPAVSPGSAEEDDMISAYVPQVITVTSAKE
EDPPMPQPSARAEEPGIEVAVLALDRRPAPSLAELDSSSSFSSMDEENDSDSDPESMAQF
QMHTYQRPPLLRSRGRGGLHRMSEAFVCFFAPDKRLTRLVEELSRDRRSIFGGMVQDFLM
AQRGALKSLAASSSSSVSSSSSRVTSVQILQGLRLFLSQMKCCLLDSGELEPPIDTLVPE
SEKDLALERAMFSCILRPLKSHLEKALMALHNQDGSNERLTQNMLLLRGDDAMDQLGVQT
GVPDSREVERVKQKLVLMQRTHSPIDKVLLLLQVCKCVHKAMGTLYGQEVSWEDFLPSLS
YLIVQCNRPHILIEVEYMMELLEPSWLGGEGGYYLTSVYASLHLIQSLDQNKPFSGCLMP
ETQEALKEWSCRRSQEAQKQKENRHSQRCVRILFQDGERSAVRTLQWRAGETSQALAQLC
ATTFEVSDPQQYTLYWRSGGEMRALPAQAQPQDLASHTEGGPSLSYLRTDHDFSKMRRLT
RGGAVDLSESVCEE
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgttggccagcacccagcgaggctctccgaaagccttcagcgtcctggatcgt
cttctgctgacacatccggtgtggctgcagctgtcactcaaccaagactctgccctctac
atcctgctcagagagcctgttgggacatttttggtgcgcaaatgcagctccagccagagg
aaggtgctgtgtttgagagtaacagctgacagaagttcctcctgtattaaggagtgcttc
atctgtgaggaagactccacattcgccttggagagctcagcactcagcttccccgacctg
tgtcgactggtggccttctactgtgtcagcagggatgtgttgcctttccctcttcagcta
ccagacgccatcgctgaagccacaacgcacaggcagctggaggccatctctcacatggga
caagacttctggagcttgccgactgcttctgagatccaaaatggaccggtggacctggat
gaaacaaccagcggcagccagggccagacggcggtgaacctgctgacccaaggcagacaa
ggcaaactctgcttcatcaacccgctcttcctgcagctggaagtcagcaagccacaactc
acaaaccacagtgcctccaataaaaggcaccgcttcaagcgcagcatgcggctccggctc
tccgagtcctccatgaatctgtccctcgaaggggtcggctcctactcacctcccccgtca
gtggagcatcccggcgggtcagagcggctgcaaaagtccggcgacaacccacagaggaga
gttcacgctggggcaggagtcttgaggagaacccctgctgtatcacccgggtctgcagag
gaagatgacatgatttctgcctacgtgccacaagtaataacagtaacatctgccaaggag
gaagatcctccaatgccccagccgtctgcccgagcagaggagccaggcattgaggtggca
gttctggccttggatcgtcgccctgctccctccctggccgagctcgacagcagcagctcc
ttcagcagtatggatgaggaaaatgactccgattcagatccagaaagcatggcccaattc
cagatgcacacctaccagcgcccgccactgttgcgctctcgaggccgcggtgggttgcat
cgcatgagcgaggcgtttgtgtgtttctttgctccggacaagcggctgacacgactggtg
gaggagctgtccagagatagacgctccatctttggaggcatggttcaggacttcctcatg
gcacagagaggggcgctcaaatccttggctgcctcttcatcatcatcagtgtcctcttcc
tcatcacgtgtgacgtctgtgcagatcctgcagggtctacggctctttctgtcccagatg
aagtgctgcctgctggacagtggagagctggagcctcccattgacaccctggtgccagag
agcgagaaagacctggcgctggagcgggccatgttctcctgcatactcagacctctgaag
tcccaccttgaaaaagccctgatggcgttgcacaatcaggatggctctaacgagcgcctc
acccagaacatgctgcttctgagaggggacgatgccatggaccagctcggtgtgcaaacg
ggcgtcccggacagccgtgaggtggagagagtgaagcagaagctggtcctgatgcagcgg
acacactcgcctatcgataaggtcctccttctgctgcaagtctgcaaatgtgtccacaag
gcaatggggaccttatatggacaggaagtgagttgggaggacttcctgccatcgttgtca
tacttgattgtgcagtgtaataggcctcacattctgatagaggtggagtacatgatggag
ctgctggagccgtcctggctcggaggagagggtggatactacctgaccagtgtgtatgcc
agcctgcatctgatccagagcctggaccagaacaaaccgttctcaggctgcctgatgccg
gagacccaagaggcgctgaaggagtggagctgcagacggagccaagaggcccagaaacaa
aaagagaaccggcacagccagaggtgcgttcggatactgttccaggacggggagcggagc
gccgtgcggacgttgcagtggagagcaggggagaccagccaggccctggcgcagctgtgt
gccaccaccttcgaagtgtccgacccgcagcaatacaccctgtactggcgcagcggcggc
gagatgagggccctgccggctcaggctcagccccaggacctggccagccacactgaggga
ggcccctcgctctcctacctgaggaccgaccacgacttcagcaagatgcggcggctcacc
agaggtggcgccgtggacctgagcgagtcggtgtgtgaggagtga
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