Scomber scombrus (Atlantic mackerel): 134005647
Help
Entry
134005647 CDS
T10651
Name
(RefSeq) LOW QUALITY PROTEIN: acidic mammalian chitinase-like
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00520
Amino sugar and nucleotide sugar metabolism
ssco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
134005647
Enzymes [BR:
ssco01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
134005647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_18
CBM_14
Motif
Other DBs
NCBI-GeneID:
134005647
NCBI-ProteinID:
XP_062300577
LinkDB
All DBs
Position
3:complement(7990045..7992764)
Genome browser
AA seq
474 aa
AA seq
DB search
MGKLLICVGLALLLHVQLGSSYILSCYFTNWAQYRPGAGKYLPTNIDPCLCDHLIYAFAS
MDNNMIKTYEWNDEKLYGQFQALKNQNSNLKTLLAIGGWNFGTQKFTAMVSSAANRQTFI
NSVIQFLRQYQFDGLDIDWEFPCTRGSPPQDKQLFTVLVQELMSAFEAEAKKTNRPRLML
TAAVSAGKGVIDTGYQISQIGAVLDYIHVMSYDLHGSGEPTVGENSPLYKGPADQGQMIY
YNVDYAMNYWKSNGAPAEKLLVGFATYGHNFRLASSNTAVGAPASGPGPAGPFTHQSGFW
AYYEICTFLKQGATQAWDSPQDVPYAYNNGVWIGYDNVKSFQNKVQWLKQGGFGGAMVWT
LDLDDFSGTFCGQGKYPLINTLKSGLGTGASCSARTDPLPPVAPTQQLQPKPGGGSGNGG
SSAGSGFCAGKANGPYPDPTNKNHFYECQQGHTYTQSCAAGLVFDNSCKCCNWA
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagctactcatctgcgtcggactggctctcctgctgcatgtgcagctaggatca
tcctacatcctgtcctgttatttcactaactgggcacagtaccgtcctggagcaggaaag
tacctacccaccaacattgacccatgtctctgtgaccacctcatctatgcctttgcatca
atggacaacaacatgatcaagacctatgagtggaacgatgaaaaactctacggacagttc
caggccctaaagaaccagaacagcaacctgaagactctgttggccattggaggatggaac
tttggtactcagaagttcacagccatggtgtctagtgctgccaatcgtcagaccttcatc
aacagtgtgatccagtttctgcgtcagtaccagtttgacggtctggatatcgactgggag
ttcccttgcactcgtggctccccacctcaggataagcagctcttcactgtcctggttcag
gaactgatgagtgcctttgaggcagaggctaagaagaccaaccgtccccgcctgatgctg
actgctgctgtctctgctggaaagggagtcattgacactggataccagatttcccagatt
ggagcggtcttggactacatccacgtcatgagctatgacttacacggttccggggagccc
actgttggagagaacagccctctgtacaagggacccgctgaccagggacaaatgatctac
tacaatgtggactatgctatgaactactggaagagcaatggtgccccagctgagaaattg
ctggttggtttcgccacctatggccacaacttccgcctggcttcctctaacactgctgtg
ggagctcccgccagtggtcctggacctgctggacccttcactcatcagagtggcttctgg
gcctactatgagatctgcactttcctgaagcaaggcgccacccaggcttgggacagcccc
caggatgtgccatatgcctacaacaatggtgtctggattggatatgacaatgtgaagagc
ttccagaataaggttcagtggttgaagcagggtggttttggaggagccatggtgtggact
ttggacctggatgacttcagtggaactttctgtggccagggaaaatatcctctgatcaac
accctcaagagtggactgggaactggagcttcttgtagtgctcgtactgaccccctgcct
ccagtcgcacccacccagcagcttcagcccaagcctggcggtggtagcggcaatggtggt
agcagtgcaggatctggcttctgtgctggcaaggctaatggaccctacccagacccaacc
aacaagaaccacttctatgagtgccagcagggacacacctacacccagagctgtgccgct
ggccttgtgttcgataacagctgcaagtgctgcaactgggcttaa
DBGET
integrated database retrieval system
