Scomber scombrus (Atlantic mackerel): 134005711
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Entry
134005711 CDS
T10651
Name
(RefSeq) synaptopodin-2
KO
K24066
synaptopodin-2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04820
Cytoskeleton in muscle cells
Brite
Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
134005711
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134005711
NCBI-ProteinID:
XP_062300678
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Position
23:complement(14670430..14677552)
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AA seq
1228 aa
AA seq
DB search
MFKKHRQRAKKYTLVSYGTGEDEPEFSDEEDEENQEDGQGTHAVEFTLVAPNDSEVDKHF
LTNAHSSKGVLTINWDKGLLEIERNLNNKAEMECLPDTKGKGALMFAQRRLRMDEITAEH
EELRRQGIPVEAIQEAEKKVEHSYMQSTTEDQAYMDVNIHQQSQHQQQYQQYQEQQYYEQ
QQHYQQQQQYQQQYQQQQYEEQHYQQQQMYQQQQQQQQQQQEYHQEQQQIQSYSANINGT
VHHQTSELQSSSNNRTAKPFSVQNMVVTPYSPAISGTNQDSMGQGEQIASRDERISTPAS
KTGFLQDARRRNVGKPMFTFKEAPKISPNPELLNLLNRSDKKLGFESGPEEDYLSLGAEA
CNFLQPQRVKHKTPPPVAPKPMINPNSPPWSPQGEMTNQDMPQQAENSVSTPAVAPTAEN
TPAPELEPTPAPATEPSPPAALQEAPASTTTEEPHTWTVPEPESHQQQVTPQEENGHIHS
NPQPESAPVTSWAPAQTQAQQQPSTVSWHPAQVQPQEPHPSQSPPQPAKVAHQPSHTQVQ
PQPPTNTWTPQIQTSWNQPQEQAQAQTHGQPPWAQPREQSQAQTHVQPPWAQPREQLQPQ
PQVQQPWMQSHEQPHVQQMQPTWGQPQQPMEQQPQAPWAQPSQPDTQHQPPWVQQPQQKS
QVQPPWAQQVQPETQPQPPWVQPTQHQAPQQAWSQAHAPGQVQPPWVSAPPQSQSQPQPP
INAWPSSQTQVQPQPPWIQAAQAQPPTHPAANLNPWAPVPAQAQSQPSWAQHPPEHGQPP
MNSWGPEQNQAQHQTPWAQSVPPQPAPQQNWQQPISKTPPQSPMNTWPQAQTHPQTPANA
WAPQSQQTPVNVATSMVNTQPSPKPWHPPQNTPQNQSPPPPPQRVNSFTIGQRDSSPINP
MATVFNPSPGSAFEMPAVRGKGADMFAKRQSRMEKFVVDSETVEANKASRPESPTASLPN
EWKYTPNVRAPPSRAYNPIQSPSYPPAATKQPPPGSPSSKAKKKGKDKQKPAPKPLSVID
VMKHQPYQLNSSLFTFGPAAEAAKPPVPKPDCPPPNPPIENQPIQYEQMTPIQPAGPYNA
PYPQQAYGMPMQPMVHDGQYQQTPANVYPPSNPYQQPPGGPYQQAYNQQYQQPVPPAYQP
QAPQSPNAPYQLPQVPYQPANSPPYLAAPSVPYQQQPPSSYVAPSFPVAARPECASGGNT
VAVAAPKPKFTAKKSSAQVWKPTAVEEE
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagaaacatcggcaaagggccaagaaatacacacttgttagctacggcacagga
gaggacgaaccagagttcagtgacgaagaggacgaggagaaccaagaggacggacaagga
acccatgctgttgaatttacccttgtggctccaaacgactctgaagtagataagcatttc
ctcacaaatgcccatagcagcaaaggtgtgctaaccatcaactgggacaagggtctcctt
gagattgagcggaacctgaacaacaaagcagagatggaatgtttacctgataccaaagga
aagggtgccctaatgtttgctcagcggcgcctaaggatggatgagatcactgctgaacat
gaagagcttagacgccaggggattcctgtggaggcaattcaggaagctgaaaagaaagtg
gaacactcgtacatgcagtccacaacagaggatcaagcatacatggatgtgaatatacac
caacaaagccaacaccaacaacagtaccagcaatatcaagaacagcagtactatgagcaa
caacagcactaccaacagcagcagcaataccaacaacagtatcagcagcagcaatatgaa
gaacagcattatcaacaacagcaaatgtatcaacaacaacaacaacaacaacaacaacaa
caagaatatcatcaagagcaacagcaaattcagtcgtattctgcaaacatcaatggcaca
gtccatcatcaaaccagtgaattacagagttcttccaacaatcgtactgcaaagcctttt
tcagtacaaaatatggtggttaccccttattctcccgcaataagtgggaccaatcaagat
tctatgggccaaggagagcagatagcttcccgtgatgagcgcatttctacccctgcaagt
aagacaggctttttgcaggatgcaagaagaagaaatgttggcaaacctatgttcacattt
aaggaagcaccaaaaatatcacctaacccagagttgctgaacctcctcaacaggagtgat
aagaaactgggttttgagtcaggacctgaggaagactatcttagccttggggctgaggct
tgtaatttcctccagcctcaacgtgttaaacacaagactcctccaccagtggctccaaag
cctatgatcaatcccaactctcctccttggtccccacagggagaaatgaccaaccaggac
atgcctcagcaggctgaaaatagtgtatccacacctgctgtagcccccaccgcagaaaat
acccctgctccagaactagagccaacccctgcacctgccactgagccctctccccctgct
gccctgcaggaagctcctgccagcaccactacagaggaaccgcacacatggactgtccca
gagcctgaatcccatcagcagcaagtgacacctcaggaagaaaatggtcacatacattct
aacccacaacctgagagtgctcctgtgacttcctgggctccagcacaaacacaagcacaa
caacagccatccaccgtttcttggcatccagctcaagtgcagcctcaggagccacatcca
agtcagtccccaccgcagccagcaaaggttgcacatcagccttctcatacccaagtccag
cctcagcccccgacaaatacttggactcctcaaattcagacatcctggaatcagcctcaa
gagcaagcacaagcccagacacatggtcaaccaccctgggcccagccacgagagcaatcc
caagcccagacacatgttcaaccaccctgggcccagccacgagagcaattacagcctcag
ccacaggttcagcaaccctggatgcagtctcatgaacagccacacgtacagcaaatgcaa
ccaacctggggtcaacctcaacaaccaatggagcagcaaccccaggccccatgggcacag
ccatcacaaccagacactcaacatcaaccaccatgggtgcaacaaccacagcaaaaatcc
caagtgcaacctccttgggctcaacaagttcagccagaaacccagccacaaccaccatgg
gttcagccaacacagcatcaggctccacaacaggcatggtcacaggcccatgcaccaggt
caggttcaaccaccgtgggtctcggctccgcctcagtctcagtctcagcctcagccacca
attaatgcatggccttcatcacaaactcaagttcaacctcagcctccttggatccaagca
gcccaagcacaacctccaacacaccctgcagccaatttaaatccatgggcaccagtacct
gcccaggctcagtctcaaccatcatgggcccaacatcctccagaacatggacagccgccc
atgaattcctggggaccagagcaaaatcaggcccaacatcaaacaccatgggctcaatca
gttcctccgcagcccgcaccacaacaaaactggcaacagccgatttcaaaaactccacca
cagtcaccaatgaatacctggcctcaagctcagacacatcctcagacacctgcaaatgct
tgggcaccacagtcacagcaaacacctgtgaatgttgcaacatcaatggtaaacacccaa
ccctctccaaaaccttggcatccacctcaaaacacaccacaaaaccagagcccaccacct
ccaccacagcgagtcaattcttttacaattggccaaagagattcatcacctatcaacccc
atggccactgtctttaacccatcgcccggttcagcttttgagatgccagcagtcagagga
aaaggagcagatatgtttgccaagaggcagtctcgtatggagaagtttgttgtggactct
gagactgtggaagcaaacaaggcaagccgaccagaatccccaactgcctccttaccaaat
gagtggaaatatactcccaatgtacgtgctccaccttcacgggcttataatcctattcag
tccccttcttatcccccagcagcaacaaaacagccccctccaggtagtccttcaagcaaa
gccaagaaaaaaggcaaagataaacaaaagcctgcccccaaacccctcagtgttatagat
gtcatgaagcatcaaccctatcagctcaattcttcactatttacctttggcccagcagca
gaggctgccaagccccctgtacctaaacctgactgtccacctcctaacccacctattgaa
aaccaaccaattcaatatgagcaaatgacccccatccagccagccggaccatataatgcc
ccatatccccagcaggcctacgggatgcccatgcaacctatggtgcatgatggccagtac
cagcaaactccagctaatgtttatcctccctccaatccttatcagcaacctcctggtggt
ccataccagcaagcatataaccaacagtatcaacaacctgtcccacctgcttaccaaccc
caagcgcctcagtctccaaacgctccctaccagttaccccaggtcccctaccaaccagcc
aatagtcccccctacctggcagctccctcagtaccttaccagcagcagcctcccagtagc
tatgttgctcctagtttccctgtagctgcaaggcctgaatgtgcatcaggtggcaacact
gtagctgtagctgctccaaaacctaagtttactgctaaaaagagctcagctcaggtatgg
aagcctacggcagttgaggaagagtaa
DBGET
integrated database retrieval system
