Scomber scombrus (Atlantic mackerel): 134005758
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Entry
134005758 CDS
T10651
Symbol
sox19b
Name
(RefSeq) transcription factor Sox-19b
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
134005758 (sox19b)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
134005758 (sox19b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
134005758
NCBI-ProteinID:
XP_062300731
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All DBs
Position
23:complement(24038363..24042493)
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AA seq
308 aa
AA seq
DB search
MYSMMEHELKPTGQPPSHQTSQGMSPITGNMTGNLGTNGNSHPSSKTALAPGGDPMDKVK
RPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAVHM
KEYPDYKYKPRRKTKPLLKKDTQVGKYPLSAGNLLAAAAAQGQSGSPRMESYGWGPTGGY
AGMQGEALGYTQQLHRYDLSALQYPPAMTAAQTYMNGGNSYSPMSYSSSPQQPSPVTMSM
VKAEPMSHSPPTGTPNHHRGPLQGDLRDMISMYIPGPGGDAGDPTAAQRGYSSVQQHYLT
GTVPLTHI
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatggaacacgaactgaagccgaccggccagcccccgtctcatcagacc
tcccaaggaatgtcaccgatcaccggcaacatgaccgggaacttgggcaccaacggcaac
tcacacccgagctctaaaacggcattagcacctggaggcgaccccatggataaagtcaag
cggcccatgaacgctttcatggtctggtccaggggacagaggcgcaagatggctcaagag
aaccccaaaatgcacaactctgagatcagcaagcggctgggagcagagtggaaactcctg
accgacgctgagaaaaggccatttatcgacgaggccaagcggctccgggccgtccacatg
aaggagtaccctgattacaagtacaagccacgccgcaagacaaagccactgctgaagaag
gacactcaggtgggtaagtacccgttgtcagccggaaacttgctggcggctgcagctgcg
caaggccaaagtggaagtccgaggatggagagctacggctggggccccaccggggggtac
gccggtatgcagggcgaggcgctcggctacacacagcagcttcaccgatatgacctgtca
gctctccagtacccacctgcaatgacggcggcacagacgtacatgaacggaggcaactcg
tacagcccaatgtcatacagcagcagtccccagcagccgagccctgtaaccatgtccatg
gtgaaagcagaacccatgtcccactcgcctccgacggggacaccaaaccaccataggggt
cctctgcagggtgacctcagggacatgatcagcatgtacatcccaggaccaggaggggat
gccggtgaccccacagcagcacagaggggctatagcagtgtccagcagcactaccttacc
ggaaccgtcccactcacacacatttag
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