Scomber scombrus (Atlantic mackerel): 134005762
Help
Entry
134005762 CDS
T10651
Name
(RefSeq) ras-related protein Rab-39B
KO
K07925
Ras-related protein Rab-39B
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134005762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
134005762
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
ssco04031
]
134005762
Membrane trafficking [BR:
ssco04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
134005762
GTP-binding proteins [BR:
ssco04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
134005762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
AAA_22
VGCC_beta4Aa_N
ATP-grasp_5
TniB
Motif
Other DBs
NCBI-GeneID:
134005762
NCBI-ProteinID:
XP_062300736
LinkDB
All DBs
Position
23:5074167..5091433
Genome browser
AA seq
213 aa
AA seq
DB search
MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHDWLEEARSHVQPHSIVFLL
VGHKCDLEAQRQVTRQEAEKLAGAYGMRYVETSARDAINVEHAFTELTRDIFALVRSGDI
TIQEGWEGVKSGFVPNVVHSSEEVTKSDRRCLC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgatatggctctatcagttccggctgatcgtcatcggagactccacggtgggc
aagtcgtgtctgatccggcggttcaccgagggccgcttcgcccaggtgtcggatcccacc
gtcggcgtggacttcttctcccggctggtggagatcgagccgggcaagaggatcaagcta
cagatctgggacaccgcgggtcaggagcgcttcaggtccatcaccagggcttactaccgt
aactcagtgggcgggctcctcctgttcgacatcactaatcgtcgctctttccagaacgtt
cacgattggctggaagaggctcgcagtcacgtccagccccacagcatcgtcttcctattg
gtgggccacaagtgtgacctggaggcacagcgccaggtgacccgccaggaggcagagaag
ctagcaggggcatacgggatgcgctacgttgagacgtcggcccgtgacgccatcaacgtg
gagcacgccttcaccgagctgaccagggacatcttcgccttggtgcggtctggtgacatc
acaatccaggagggctgggagggcgttaagagcgggttcgtccccaacgtggttcactcc
tcggaggaagtgaccaagagtgaccgccgctgtctctgttga
DBGET
integrated database retrieval system
