Scomber scombrus (Atlantic mackerel): 134005865
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Entry
134005865 CDS
T10651
Symbol
ntn5
Name
(RefSeq) netrin-1
KO
K06843
netrin 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ssco00536
]
134005865 (ntn5)
Glycosaminoglycan binding proteins [BR:
ssco00536
]
Heparan sulfate / Heparin
Axon guidance molecules
134005865 (ntn5)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
Motif
Other DBs
NCBI-GeneID:
134005865
NCBI-ProteinID:
XP_062300870
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Position
23:12091416..12102756
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AA seq
838 aa
AA seq
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MMFIPFSPPPSTSLFPVFLLLLLCLPPSLISSSLSHIPLSWTSPHDPCYHLDGRPRHCLS
EFINAAYGVSVNATHSFQGSDYDDITTLTDLHNPHNLTCWTAHRGTDTGDWIFTLPLGRR
FEITYISLQFCHHGEPSDPISISILKSMDYGRTWRPMQHYSSDCLRNFELPSQMVAQTRH
QETEPLCSDPRPLQKQRGGMVLAFSTLDGRPSSPDFDYSPTLQDWVTATDIRVVFHKLSK
EAKSGSSDKKEEARSRDSTEEERGTGFLRWRSGHKGNTGDQVDKTDNTLAFFNREIKNSE
IRVRNRGEKMDKPGRKGHYKGSGQDEDGHNVTSKEGGDSFSAATLPSSKKGGKNRGRGRK
RENNHWPHCQNGVCNWTVEGQSRGNKGRELRKRRNNNLNTRQSSRNLQVALPSAFISPVR
APLALSDLQVGGRCKCNGHASRCRRDDSGRAVCVCEHHTAGPDCDVCEDFHFDRPWHRAT
PTHPNPCVACECNGHSNKCRFSMEVFQQSGRRSGGVCQKCRHHTAGRHCQYCQNGYTRDH
GKPLHHRKACQPCQCHALGAVGRWCNQTSGQCLCREGVTGLRCNRCAPGFKQGRSPLRPC
IRIQEVAPTPVFQPQYSIAEECISYCQHSQVKVRMNLETYCFKDYVLKVQVRGMERSGPW
WQFSISVQTVFRTGATSRVRRGPQSLWVPDRDLSCGCPALHVGRTFLLIGAEEGERGWSP
EESRLVADRSTLALQWREHWSPKLRGFRGQDKRGRCPTKPPDNHREHSKPQSGYIPPHLL
TEKDSEPDGANAYDTQTSVVPHTHSHTDSGIQSMETTSSPSTLPLVCSTQGPTLKTQT
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcatacccttttcccctcccccctccacctctctcttccctgttttccttcta
ctcctcctttgccttcctccgtccctcatctcctcttccctctctcacatcccgttgagc
tggacttcacctcatgatccctgctaccacctagatggccgtccacgacactgcttatca
gagttcatcaatgccgcctatggggtctcagtcaatgccacccactcgttccaagggtct
gattatgatgacatcacaaccttgactgacctgcataatcctcacaaccttacctgctgg
acagctcacagaggtaccgacaccggggactggatcttcaccctgcccctgggacgacgc
tttgaaatcacctatataagtttgcagttctgccatcacggggagccatcagaccccatc
tccatctccatcctgaagtcgatggactatgggcgcacttggaggccaatgcagcattac
tccagcgactgcctcaggaactttgagctgccttcccagatggtagctcagaccaggcat
caagagacagaacctctctgctcagatccccgacccttgcaaaagcagcggggtggcatg
gtgctggccttctccaccctggacggacgtccatcctctccggatttcgactacagcccc
accctccaggactgggtgacggccacagacatccgtgtggtcttccacaaattgtccaaa
gaggccaaatcgggtagttcagataagaaggaagaagcacgatcgcgtgatagtacagaa
gaggaaagggggactgggtttctgaggtggagatcaggccacaagggaaacactggagat
caggttgacaagacagataatacactggcattttttaacagggagataaaaaactcagag
atcagagtgaggaacagaggggagaaaatggacaaacctggacgcaagggtcattataaa
gggtcaggtcaagatgaagatgggcacaatgtgaccagcaaggaaggcggggacagtttc
agcgctgccacgctcccgtcttcaaagaaaggcgggaaaaacaggggacgtggccgcaag
agggaaaacaatcattggccgcattgccaaaatggcgtctgtaattggacagttgaaggg
cagagcaggggcaacaaagggcgggagctgaggaagcggaggaacaataatctcaacacg
agacaaagctccagaaatctgcaggtggctctgccgtctgcttttatctccccggtacga
gctcctctagccctctccgacctgcaggtcggaggcaggtgtaaatgtaacggacacgct
tccagatgtcgtcgtgacgactcagggcgggcagtatgtgtgtgtgagcatcacacggcg
gggccagactgtgatgtgtgtgaggatttccactttgacagaccctggcatcgagctaca
cctactcacccaaacccctgtgttgcctgtgagtgtaacggccactcaaacaagtgccgc
ttcagcatggaggtgtttcagcagtcgggacggcgcagcggaggcgtgtgtcagaagtgt
cgccaccacactgccggacgccactgccagtactgccagaatggatacacccgcgaccac
ggcaagccgctgcaccatcgcaaggcctgccaaccgtgtcagtgccatgctttgggagca
gtgggtcgctggtgtaaccagacatcaggtcagtgtctgtgtcgagaaggagtgaccggc
ctcaggtgtaaccgctgtgccccgggattcaaacagggcaggtcccctctacggccatgc
atacgaattcaagaggtcgctccgaccccagtcttccagcctcaatacagcatagcggag
gagtgtatttcctactgccagcattctcaggttaaagtcaggatgaacctggagacttat
tgtttcaaggactatgtgctgaaggtgcaggtgagagggatggagcgttcaggtccctgg
tggcagttctccatctcggtgcaaaccgtcttccgcacaggggccacatcccgtgttcga
aggggcccccagtccctttgggtccccgaccgtgacctctcctgtggctgcccagccctt
cacgtgggccggaccttcctcctgattggtgccgaggagggagagcggggctggagccca
gaggaaagtcgccttgtggcggaccgttccactctggccctccagtggcgggaacactgg
agccccaaactcaggggcttccgggggcaggacaagaggggccgttgtcccactaaaccc
cctgacaaccacagggagcattcaaaaccccagtctggatacatcccccctcacctgctg
actgagaaagacagcgagcctgacggtgcgaacgcatatgacactcaaacctcagtggtg
ccgcacacacactctcacacagacagcgggattcaatccatggagacgacctcctcacct
tctacacttccacttgtgtgttctactcaaggtcctacattaaaaacacagacataa
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