Scomber scombrus (Atlantic mackerel): 134006061
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Entry
134006061 CDS
T10651
Symbol
arhgef15b
Name
(RefSeq) rho guanine nucleotide exchange factor 15 isoform X1
KO
K20687
Rho guanine nucleotide exchange factor 15
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
134006061 (arhgef15b)
Membrane trafficking [BR:
ssco04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
134006061 (arhgef15b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_2
SH3_9
PH
SOS1_NGEF_PH
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
134006061
NCBI-ProteinID:
XP_062301110
LinkDB
All DBs
Position
23:complement(12364738..12382956)
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AA seq
1079 aa
AA seq
DB search
MSVHEAALRPTSPLPLKPEAKTRPEIPPKPSTQSSSLPLGDENGDESLAAGKVKRIVNKF
SKKEVAPSEANELPANGSAKFKPSKPFKRAPTIKPKPSRASLPLQLGREQAPPLPAKRSR
NPQKQKESVGGEEGDGISVEGRRSAPDGKEVEVQLNGGGEAEVEHRPDTPLSPCCEPSCS
CVCHFQRPGMKLIWVPVDVEDGEEEEEEEEDVEEDVEEEMEEEEDVTDGEGDSWEGEDKE
VERGGEGDSEAEYEVDRTLAVDEGVISKLDKAKFHHSLGVLISEGNRRRSDPGPHAVLTS
LAVTRSQSPPVPPKQTQSHHKAIDEEENIYEATLPVIDRTPRKSSSVCKELDIPLIKVRK
PARWSKLSSSSSDPTSEFEVDAGSVSSPDIMPPAIPPRMPVTQDNRVLTPVHRGGIPLPQ
PTREEWRMLRPSSPSSSSTGGLSPQRAVTPPPTSSLQPQRAPPPPPKIDPRRLSSASLQS
LTQKKDGEENGGNEGEKEDTEEETLPVRSGSFRGETPFSWKSRLQDEPLYQTYRATVITK
EIRRQTVCRNISKTSADYAMDWTARKPGTGTLTGTGTATGNGAPRASPVPTPGQSTLWQD
LPAIRESGVLEELTPEECKYQESMFEVLTSESSYLRSLRVLTEHFLESRDLDETLVIMDK
KTLFSNILRVREVSERFLKDLEDRIFVTHLFSDICDIIHYHAQHNFPAYIDYVRNQIYQE
KIYTKLMKNNVQFATVITRLQESPQCQRLPFMSFLLLPFQRITRIKMLIENILKRTKEGT
NEEQTASKSLASVSKIINECNTQVGRMRQMEELILISQTLEFDKLKAIPIISQTRFLEKK
GELQEMSKGGTIFNMRAKFTPIYLFLFNDLLIIAAKKGAERFVVLDHAHRSLVQVQPLEE
GGSSTGTYEHCLNLTLLENHQGRMMERLIKAPSQSDMHRWMAAFPNPTNPDTDEEEVIYE
DWGEDSCTIFFDTNYFMFIVTYCYVCVSDCPQMHCVEQYIAQQADELTLEPTEIINVIRK
TNEGWIEGIRLSDGQKGWFPAQNVLEITNEHVRRRNLRERYRVIQAASTVATTKTRTTQ
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtccatgaagcagctctacggcccacgtccccgttacccctcaaacccgaggcc
aaaacgagacctgagatccctccaaagccttcaacgcaaagcagttccctccctctcggg
gatgaaaatggcgacgagagcctcgctgctgggaaggtgaagaggattgtgaacaaattc
agcaaaaaggaggtcgcaccaagtgaagcgaatgaactccctgccaacggtagtgccaaa
tttaagccaagcaagccgttcaaaagagccccaaccataaagcccaagccaagccgtgcc
agtctaccacttcagctgggcagagagcaggcgcctccgctgccagcgaagaggagccgc
aacccacagaagcagaaagagagcgtggggggagaggagggggacggcatcagtgtggaa
ggacgtcgatcagcgcctgatggaaaagaggtcgaggttcagctgaacggaggaggggaa
gcagaggtggagcacagaccagacacgccactcagtccctgctgcgagccgagctgcagc
tgcgtgtgccacttccagcggccgggcatgaaactgatatgggtgcctgtcgacgtggaa
gatggtgaggaggaggaggaggaagaggaggatgtggaggaggatgtggaggaggagatg
gaggaggaggaggatgtgactgatggggaaggggacagctgggagggggaagacaaggag
gtggagaggggaggggaaggggacagcgaggcagagtatgaggtggacaggactttggca
gtcgatgagggtgtgatatcaaaactagacaaagcaaagttccaccactctctgggggtt
ttaatcagcgagggtaacaggaggcggtcggaccccggtcctcacgccgtcctcacctcc
ctcgctgtcactcgctctcagtctccgcctgttccccccaaacagactcagtcccaccac
aaagccatcgacgaagaagaaaacatttacgaggccacgcttccagtgattgaccgtact
cccagaaagagctcgtctgtgtgtaaggagctcgatattcctctgatcaaggtgcgcaaa
ccggcccgctggtctaagctgtccagcagctcctcagacccgacttcagagtttgaggtg
gacgcaggttcagtatcgagcccagacatcatgccacctgccatcccgccccgcatgccg
gtgactcaggacaaccgcgtcctcacaccggtgcaccggggcggcatacctctcccgcag
ccaacgcgggaggagtggcgcatgttgaggccttcctctcccagcagctcctcaaccggt
ggcctgagcccccaacgagccgtcactccacccccaaccagctccctccagcctcaaaga
gcgccacctccaccgccaaaaatagatcccaggaggctcagcagtgcatcactgcagtcc
ctcacacagaagaaagatggagaggagaatggagggaatgaaggcgagaaagaggacaca
gaggaagaaacacttccagtcaggagcggctccttcaggggggagactccattcagctgg
aagtcacggctgcaggatgagcctctgtaccagacataccgggccactgtcatcaccaag
gagatccgacgccagacggtttgtcgtaatatcagtaagactagcgcggactatgccatg
gactggaccgcccgcaagcccgggactgggactttaaccggaactggaactgcgactggt
aacggagcacccagagccagccctgtgcccacaccaggccagagcaccctgtggcaggac
ctcccagccatacgggagagtggcgtgctggaggagctcactcctgaagagtgcaagtac
caagagagtatgttcgaggttctgacatcggagtcctcttaccttcgatccctgcgcgtt
ctgaccgagcacttcctggagagccgggacctggatgagacgttggtcattatggacaag
aagaccctcttctccaacatcctgagggtccgcgaggtcagcgagaggttcttaaaggat
ctggaggaccgcatatttgtgacacatctcttctcagacatctgcgacattatccattac
cacgcccagcataacttccccgcctacatcgactatgtccgcaaccagatctaccaggag
aaaatctacaccaagctcatgaagaacaatgtgcagtttgcaactgtcatcactcgtctc
caagagtctcctcagtgccagcggctgcccttcatgtccttcttgctgctgcccttccag
cgaattacacgcattaaaatgctcattgagaacatcctgaagagaacaaaagaagggacg
aatgaggagcagacagcctccaagtctttggcttcagtctcaaagatcatcaatgagtgt
aacacacaggtgggaaggatgagacagatggaggagttgatccttatctctcaaacactg
gagtttgacaagctcaaggccatcccgatcatctcccagactcgattcttggagaagaag
ggcgagctccaggaaatgtccaagggaggaacaatctttaacatgagggccaagttcact
ccgatctatctcttcctgttcaatgatctgctaatcatcgctgccaagaagggcgccgag
cgtttcgtggtacttgaccatgcccaccgctctctggtgcaggtgcagccgctagaagag
ggtgggagcagcactggcacctacgagcactgcctcaacctcacgctattggaaaaccat
cagggacgcatgatggagcggctgatcaaagctccgtcccagtcagacatgcacaggtgg
atggcggctttccccaaccccaccaaccctgatacagatgaagaagaagttatttatgag
gactggggtgaggactcgtgcaccattttctttgacacaaattattttatgttcatagtt
acttactgttatgtgtgtgtgtcagactgtccccagatgcattgtgtggagcagtacatc
gcgcagcaggcagacgaactcaccctggagcccactgagatcatcaacgtcatccgcaaa
accaacgagggctggattgaagggatccgcctgtctgacggtcagaagggctggttccct
gctcaaaacgtcctagagatcaccaacgagcacgtgaggagacgaaacctgcgcgagcgc
tacagagtcatacaggctgcgagtactgttgccaccaccaagacccgcaccactcagtag
DBGET
integrated database retrieval system
