Scomber scombrus (Atlantic mackerel): 134006076
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Entry
134006076 CDS
T10651
Symbol
tgfa
Name
(RefSeq) LOW QUALITY PROTEIN: protransforming growth factor alpha
KO
K08774
transforming growth factor, alpha
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04010
MAPK signaling pathway
ssco04012
ErbB signaling pathway
ssco04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
134006076 (tgfa)
04012 ErbB signaling pathway
134006076 (tgfa)
04020 Calcium signaling pathway
134006076 (tgfa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ssco04052
]
134006076 (tgfa)
Cytokines and neuropeptides [BR:
ssco04052
]
Cytokines
Growth factors (RTK binding)
134006076 (tgfa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
EGF_Teneurin
EGF_laminin
Motif
Other DBs
NCBI-GeneID:
134006076
NCBI-ProteinID:
XP_062301126
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Position
3:18808594..18812937
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AA seq
257 aa
AA seq
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MTRIFWDTIFLISGSLFTFGAGQSHSTIIDASISIDTNSTAAPNSSTSSSAATGSRNSTA
TTIANTTNIPPVKNSLFSFGEGQSNSTIIDASISIDTNSTAAPDTSTSSSAATSSRNSST
TIIATTTSTIPPVKKFVAAAVRSHFDDCPDSHRHFCFHGTCRFLILEETPACVCHQGFVG
MRCEHADLLAVVATNHRQQTIATMLVLCVIGCVLXHGVVYTFTLLVEAGLSQAEPCTSLR
PREIQQHAEAWSILLSF
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgactcggattttctgggatacaatttttctcataagcggttccctctttacttttgga
gcagggcagagccattcaacaattattgatgccagcatttccattgatacaaactccact
gctgctccgaactcctccacaagcagctctgctgcaaccggcagcagaaatagcactgcc
acaactattgcaaatactactaacatccctccagttaaaaattctcttttttcatttgga
gaagggcagagcaattcaacaatcatagatgccagcatttccattgacacaaactccact
gctgctcccgacacttccacaagcagctctgcagcaaccagcagcagaaacagctcaaca
acaattattgcaactaccacttctaccatcccgccagttaaaaagtttgtggcggcggct
gttcggtcacattttgatgactgtccagactctcaccgccatttctgcttccatggtaca
tgtcgtttcctaatactggaggagacccccgcttgtgtatgtcatcaaggcttcgttggg
atgaggtgtgagcatgcagacctgcttgctgtagtagcaaccaatcacagacaacagacc
attgccacaatgctggtgttgtgtgtgatcgggtgtgtcctcnatcatggtgttgtgtac
acttttacattgctggtggaggcaggactgtcgcaggcggagccatgcacatcactacgt
cccagagaaatccagcaacatgctgaagcatggagcatcctactgtccttctga
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