Scomber scombrus (Atlantic mackerel): 134006345
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Entry
134006345 CDS
T10651
Symbol
plcb3
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 isoform X1
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00562
Inositol phosphate metabolism
ssco01100
Metabolic pathways
ssco04020
Calcium signaling pathway
ssco04070
Phosphatidylinositol signaling system
ssco04081
Hormone signaling
ssco04082
Neuroactive ligand signaling
ssco04261
Adrenergic signaling in cardiomyocytes
ssco04270
Vascular smooth muscle contraction
ssco04310
Wnt signaling pathway
ssco04371
Apelin signaling pathway
ssco04540
Gap junction
ssco04621
NOD-like receptor signaling pathway
ssco04912
GnRH signaling pathway
ssco04916
Melanogenesis
Module
ssco_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
134006345 (plcb3)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
134006345 (plcb3)
04371 Apelin signaling pathway
134006345 (plcb3)
04020 Calcium signaling pathway
134006345 (plcb3)
04070 Phosphatidylinositol signaling system
134006345 (plcb3)
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
134006345 (plcb3)
04081 Hormone signaling
134006345 (plcb3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
134006345 (plcb3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
134006345 (plcb3)
09152 Endocrine system
04912 GnRH signaling pathway
134006345 (plcb3)
04916 Melanogenesis
134006345 (plcb3)
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
134006345 (plcb3)
04270 Vascular smooth muscle contraction
134006345 (plcb3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
134006345 (plcb3)
Enzymes [BR:
ssco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
134006345 (plcb3)
Membrane trafficking [BR:
ssco04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
134006345 (plcb3)
Endocytosis
Macropinocytosis
Phospholipase C
134006345 (plcb3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PLC-beta_C
PI-PLC-Y
PH_14
PLCB1-4-like_EFh
EF-hand_like
Motif
Other DBs
NCBI-GeneID:
134006345
NCBI-ProteinID:
XP_062301418
LinkDB
All DBs
Position
23:16480096..16542229
Genome browser
AA seq
1257 aa
AA seq
DB search
MAGAKPGVHALQLKPVSVHEALKKGGKFIKWDEEPNSGPPTLVTLRVDPDGFFLYWTGGS
NLEVEILDISTIRDTRTGKYAKLPKDHKVRDVLGCGKADSVEGKLVTVVYGNDLVNTSYL
NFQAMQEDTAKIWTDELFTLATNILSQNSSRNTFLLKAYTKLKLQVNQDGKIPVKNILKM
FSDKKRVETALEQCGLVNNKSEGIKPDDLTWEAFQKFLDALCLRSEIQSIFEESGSKRKP
FISLDQLTDFINHRQRDSRLNEVLYPPLKREQVRQIMERYETNTSQLERDQISVQAFSRY
LGGEENTITPPERLDVIDDMTQPLSHYFINSSHNTYLTVGQLTGLSSVEMYRQVLLTGCR
CVELDCWKGRPPDEEPYITHGFTMTTEIPFKEVIEAIAESAFKTSPYPVILSFENHVDSA
KQQAKMAEYCRTIFGDALLIDPLEKYPLIPGQALPSPQEMMGKILIKNKKKHHHRPSSGG
SIRRRELEEQSSPHNDCPLTDGEGSQLLSNGEEKLAERLVKDSEPRKSIGGEGESEEDED
DEPVTELKKPNSDEGTASSEVNATEEMSTLVNYIEPVKFKTFEVANKRRKFFEMSSFVET
KGMDTLKSSPIEFVEYNKNQLSRIYPKGTRVDSSNYMPQLFWNVGCQMVALNFQTLDLPM
QLNMGVFEYNGGSGYLLKPEFMRRTDKHFDPFTENIVDGIVANTVKIRVMSGQFLTDKKV
GVYVEVDIFGLPADTKRKYRTKTSNGNSLDPVWDDEIFIFNKIVLPTLASLRIAVFEENG
KFIGHRILPVSAIRPGYHYINLKNELNQPLLLSSLLVCTEAQDYIPNEHQEYAEALTNPI
KHVSQLDKRETQLAVLLEENSEHVLNQPKEGEPNKESEVIPGCQLPSPFHNILPCQLEDV
PDVINLPTPAQSQKEDLIATVLADIEVQSAEELRQQKNYTKTAKKHSKELKELHKKHLKK
VWNLSKEQKSRNSQLQSDTQRRRSQMEKHLKRSIRKNEPQEPVQRELTALDQELEKQVVQ
LREWQMQELLKLRQQQHTVEREKQQTHLQEAYQKLKETAHECQAVQLKKLRETCEKEKKE
LQKILDRKRQNSISEAKSRDKDKAETELNDINRKHIQDSVTLIRRLEEAQTRRQDKVMLR
QREVLQHIDEELPLLQSQLEREQEEEYKRLPEEICQHLQSELQNKGLRKDALFSSLSNHS
SPSSGSGPPSNCSTPSYPSTPNRSTWNRSLDNSNASLADSTSSSATPVLSEGEMSFS
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggccggggccaagccgggagtccacgcgctgcagctcaaacccgtgtccgtccacgaa
gcgctgaagaaggggggcaaattcatcaaatgggacgaggagcctaacagcggccccccc
accttggtaacactgagagttgacccagatggattctttctgtactggactggagggtcc
aacctggaggtggagattctggatatcagcaccatcagggacacccgaacaggaaagtac
gccaagctaccaaaggaccacaaggtgcgggatgtgctcggctgcggtaaggctgacagt
gtagaagggaagctggtaaccgtcgtctatggaaacgacctggtcaacacctcctatctc
aacttccaggctatgcaggaagacacagccaagatttggacagatgagctgttcactttg
gccacaaacatactctcccagaattcatcgcggaacaccttcctcctcaaagcgtacact
aagttaaagttgcaggtgaatcaggacgggaagattccagtgaagaatattctcaagatg
ttttcagataaaaagagagtggagacggctctggagcagtgcggcctcgtaaataacaag
tcagagggaataaagccagatgatttaacatgggaggccttccagaagtttcttgacgct
ctctgtctccggtctgagatacaaagcatctttgaagaaagtggatccaagaggaagccg
ttcatctctttggaccagctgacggacttcatcaaccacaggcagcgagactctagattg
aacgaggtgttgtaccccccgctgaaaagagaacaggtccgacagatcatggagagatat
gagaccaacaccagccagctggagagagaccagatcagcgtgcaggctttcagtcggtat
ttaggaggagaagaaaacaccattacacctcccgagaggctggacgtaatcgacgatatg
actcaaccgctgtctcactattttatcaactcctcacacaacacatacctcacggtgggt
cagctgaccggtctatcatcagtagagatgtacagacaggtgctgttgaccggctgtcgc
tgcgtcgagctggactgctggaagggccgaccgccagacgaggagccgtacatcacccac
gggttcaccatgacaactgagatacctttcaaggaggtgattgaagcgatagcagagagc
gctttcaagacctcgccgtaccccgtcatcctgtcctttgaaaaccacgtagattcggcc
aagcagcaagccaagatggcggagtactgcaggaccatatttggagacgccctgctcatt
gatccactggagaaatatccgctgatacctgggcaggcgctcccctcgccgcaggagatg
atggggaagattctcatcaaaaacaagaagaagcaccaccatcggccctccagcggtggc
agcattcgacgcagagagctggaggagcagtcgtcgcctcacaacgactgccctttgaca
gacggcgaggggagccagctgttgtccaatggggaggagaagctggctgagagattggtc
aaagactcagagcctcgcaagtccatcggaggtgagggagagagcgaggaggacgaagat
gacgagccggtgacagaactgaaaaaaccgaactctgatgaggggacagccagcagtgag
gtgaacgccacagaggagatgtcgaccctcgtcaactacatcgagcctgtcaagtttaag
acctttgaggtggcaaacaagaggaggaaattctttgagatgtcgtcattcgtggaaacg
aaaggcatggacacgctaaagagttcccctatcgagtttgtcgagtacaataagaatcag
ctgagccgaatctaccctaaaggaacgagggtggacagctccaactacatgcctcagctc
ttctggaacgtcggctgccagatggtggcgctaaacttccagaccctcgacctccctatg
cagctgaacatgggggtgtttgagtacaacggcggcagtggctacctgctgaaacccgaa
ttcatgagaaggacagacaaacacttcgaccctttcacggagaacatcgtggatggaata
gttgccaatactgtcaagattagggtgatgtcaggccagttcctgacagataagaaggtt
ggcgtgtacgtggaagtggacatatttggacttcctgcagatacaaaacggaagtataga
accaaaacgtccaatgggaattcactggaccctgtgtgggatgatgaaatttttatcttc
aataagattgtcctccctacactggcctctctgaggatagcagtgtttgaggaaaatggg
aagtttattggacaccgtatcctccctgtgtccgccattagacctgggtaccactacatc
aacctaaagaatgagttaaaccagccgctcctgctgtcctctctgctggtttgcactgag
gctcaggactacatccctaatgaacaccaggagtatgcagaggccctgaccaaccccatt
aaacacgtcagtcagttggacaagagagagacacagctggctgttctccttgaggaaaac
agtgagcatgtcctcaaccagcccaaagagggagaacccaacaaagagagcgaggtcatt
ccagggtgtcaactcccctcccccttccacaatatcctcccctgccaattggaggatgtc
cccgacgtcatcaacttacctacgccagcgcaaagccagaaggaggacctcatagccaca
gttctggcagacatagaggtccagtctgcagaggagttgaggcagcagaaaaactacacg
aagactgcaaagaaacatagcaaagaactcaaagagcttcataagaaacaccttaagaag
gtgtggaacctgagtaaggagcagaagagtcgaaacagtcagcttcaatctgacactcag
aggaggcgcagtcagatggagaaacacctcaaacggagcatcaggaaaaatgagcctcag
gagccagtgcagcgggaactgacggcgttggatcaggagcttgagaagcaggtggtccag
ctgagggaatggcagatgcaagagctgctgaagctccgacagcaacaacacacggtggag
agagagaagcaacagacacatctgcaagaggcctaccagaagttaaaggagacggcccat
gaatgccaagcagttcagctcaagaagctcagggagacgtgcgagaaggagaagaaagag
ctccagaaaatcctggacaggaagcggcagaacagcatcagcgaagccaagagccgtgac
aaagacaaggctgaaacggaactgaatgacatcaacaggaaacatattcaggattcggtc
acactaatcagaaggctggaggaggctcagaccaggagacaggacaaggtgatgctgaga
cagcgggaagtgttgcagcacatagatgaggaacttccactgctccagtctcagttggag
agggaacaggaggaggagtacaagcgattaccggaggaaatctgccagcacctgcagtcg
gagctccaaaacaaaggtctgcgaaaggacgccctgttttcctctttgtccaatcatagc
agccccagctccggctcgggtccaccctccaactgctccacaccctcctacccgtcaacg
cccaatcgaagcacctggaataggagcctggacaatagcaatgcctcattggccgattcc
acgtcttcatccgccacccctgtcctgtcagagggagagatgtcgttcagttag
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integrated database retrieval system
