KEGG   Scomber scombrus (Atlantic mackerel): 134006347
Entry
134006347         CDS       T10651                                 
Symbol
per1b
Name
(RefSeq) period circadian protein homolog 1b isoform X1
  KO
K21944  period circadian protein 1
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssco03400]
    134006347 (per1b)
DNA repair and recombination proteins [BR:ssco03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    134006347 (per1b)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 134006347
NCBI-ProteinID: XP_062301422
LinkDB
Position
23:11974977..11994507
AA seq 1460 aa
MSYDNSKSVASSNARGRVARAGEKVNDQEAQFEGLNSPKSSSSGSQPSANVSTQEQGSRA
DGGSSPSGGSGSGGMSSDQRGPNSDDMDGLSSGNDSGERESEGGMERGGSSRGRQSVRSS
HSSSNGKDSGMMLETTESNKSSNSQSLSPPSGSLAYSLLMTSSEHDPPSTSGCSSDQSAR
VQTQKELMKAIKELKLRLPSERKSKGHSSTLNALKYALQCVRQVRANKEYYHQWSVEECH
GCSLDLSAFTIEELDNITSEYTLKNTDTFSMAVSFLSGKVVYVSPQGSSVLRCKPECLQG
TMFSELLAPQDVSTFYSGTAPCRLPLWASCIGSASPPVDCTQEKSMFCRISANRTQGGEM
RYHPFRLTPYQLTIRDSDTSEPQPCCLLIAEKVHSGYEAPRIPPDKRIFTTSHTPSCLFQ
EVDERAVPLLGYLPQDLVGTPTLLYIHPEDRPIMVAIHEKIFQFAGQPFEYAPLRMCARN
GEYLTIDTSWSSFVNPWSRKVAFIVGRHKVRTSPLNEDVFTIPHGCEGRTTTPDVVQLSE
KIHRLLVQPVHSGSSQGYSSLGSSGSRGSRRSHQQHLSASATSSSDSNGPAMDKAAVAIA
LHKPMTFQQICKDVHMVKTNGQQVFIESRNRPLPRKNTNTGTATSLRAISSDPIRGLVAD
MTKPPAALLPAPFVQKEHPIGYSYQQINCLDSIIRYLESCNIPNTVKRKCGSSSYTTSST
SDDDKQQEARRNTKGGSVSLVGEPAPLPPLTMATKAESVASVTSQCSFSSTIVHVGDKKP
PESDIVMEEVSITPTPAPPFTTTLSPAARGMAPPANTAIAPPLPPPPPPPVRDTWRSGSG
GGGGRRGLTKEVLSAHTQQEEQAFLHRFKDLSKLRVFDQTASSTVRCHTQAANPLSRGVR
CSRDYPAAGGSTGRRGRGGKRLKHQESSDQHSSMGLNGNLRDLRTGTALGPFNMALGPQT
SSSSWPSVCSQASIPAAPFAPGMLPIYPVYPPLAQPLPVPDPMRFPATQMVPPQMVPPQM
VPPQMVPPMMALVLPNYMFPQMGAPIAQPAANPGHFYNPNFTYPGATPAVVPTAISNPMP
IPPVTGAPSRSSTPQYYSQTPADREGAESPLFQSRCSSPLNLLQLEESPSNRLEVATAHA
TSQQATPSVQGGAAGGQSSPNQRSSDDTSKENENGETNDSNQDAMSTSSDLLDLLLQEDS
RSGTGSAASGSGSSGTRSSGSGSGSGSNGCSSSGTSGTSSSQGSHTSKYFGSIDSLENDH
TRKQPAGGSSSPGGDGGEEQFIKCVLQDPIWLLMANTDDKVMMTYQLPVRDLDTVLREDR
EALRNMQKQQPRFTEDQKRELSQVHPWIRTGRLPRAVNISGCTGCKSPTSAPPAAPFDVE
IHEMELCSVLKSQEEGADKAKKNQSETAMDETQPEDEDEEEEVEEKETKTQDSNQDMTTE
EQRETSESVAVKSNESDMTH
NT seq 4383 nt   +upstreamnt  +downstreamnt
atgagttatgacaactctaaatcagtggccagcagcaacgcccgggggcgagtggcaagg
gccggcgagaaggtcaatgaccaggaagctcagttcgaagggttaaactccccaaaaagc
agcagcagcggcagtcagcccagtgccaatgtcagcactcaggagcaaggaagcagagcc
gatggaggctcctctcccagcggagggtcaggatctggagggatgtccagtgaccagagg
gggcccaactccgacgacatggacggcctctccagcgggaacgactctggggaaagggag
agcgagggcggtatggaaagggggggcagctcccgcgggcgtcagtctgtacgcagctcc
cacagctcgtccaatggcaaagactctggcatgatgctggaaaccacagagagcaacaag
agctccaactcccagagtctttcaccgcccagcggctccctggcctacagcttgctcatg
accagctcagagcacgaccctccctccacctctggctgcagcagcgaccagtcggcaagg
gtccagacccagaaagagctgatgaaggccatcaaggagcttaagctccgcctgccatct
gagcgcaaatccaagggtcactccagcactctaaatgcacttaaatatgccctccagtgt
gtcagacaagtccgagccaacaaggagtactatcatcagtggagtgtggaggagtgtcat
ggatgcagtctggacttgtctgccttcacaattgaggagcttgacaacatcacctcagaa
tacaccctcaaaaacactgacacattctcgatggccgtgtctttcttgtcagggaaagtt
gtgtacgtatccccccagggctcgtccgtactgcgctgtaagcccgagtgtctccagggg
accatgttttcagagcttttggcgcctcaggacgtcagcactttctacagcggcacagca
ccttgccgcctcccactctgggcatcgtgcatcggatctgcctctcctccagttgactgc
actcaggagaagtccatgttctgtcgaatcagcgccaaccggacacagggcggcgagatg
cgctaccacccctttcgcctcacaccctaccagctcaccatcagagattcagacacttct
gagccacagccttgctgtctgctcattgctgagaaagtccactctggatacgaggctcct
cggattcctccagacaagaggattttcaccaccagtcacactcccagctgcctttttcag
gaagttgatgagagggcagtgccgttgttgggctacctgcctcaggacttggtgggaacc
cccactctgctctacatccaccctgaggacagacccatcatggtggctatacacgagaag
atctttcagtttgcagggcagccatttgagtacgcgccgctgagaatgtgcgcccgcaat
ggtgaatacctgaccatcgacaccagctggtcttccttcgtcaacccctggagccggaag
gtggcatttattgtagggcgccacaaagtcagaacgagcccactgaacgaggacgttttc
acgataccgcatggctgcgaaggtcgcaccacaactccggacgtcgtgcagctgagcgag
aagatccaccggctcctagtgcagcccgtgcacagcggcagctctcagggctacagctcg
ctcgggtccagcggctcccgaggctctcgccgctcgcaccagcagcacctcagtgcctcg
gccacctcctccagcgacagcaacggccccgccatggataaggctgctgtcgccatcgct
ttgcacaagcctatgacgttccagcagatctgcaaagatgttcacatggtcaagaccaac
gggcaacaggttttcatcgaatcccgtaaccggccactgcccagaaaaaacaccaacaca
ggcacagcgaccagcctcagagccatcagcagcgacccaatcagaggtttggtagctgat
atgaccaagccccctgcagccctgctccccgccccatttgtacagaaagagcaccctatt
ggctactcctaccagcagatcaactgtttagacagcatcataaggtacttggagagctgt
aacattcctaacacggttaaaaggaaatgtggctcatcctcctacacgacttcctccacg
tctgatgatgacaaacagcaagaagcacgcagaaacaccaaaggcggttcagttagcctg
gtaggggagcctgcccctctgccaccactgaccatggccaccaaggcagagagtgtagcc
tcagtcacttcccagtgtagcttcagcagcaccattgtgcatgtgggagacaagaaacct
cctgagtcagacatcgtcatggaggaagtttctatcactcccacgcctgctcctcctttc
actactactctaagtcctgccgctagaggcatggcgcctcccgctaacacagccatcgcc
cctcctcttcctcctcctcccccgcccccagtgagggacacctggagaagtggaagtgga
ggaggcggaggccggcggggtctgacaaaggaggtgctctccgcccacacccagcaggag
gagcaggcgttcctccaccgctttaaggacctcagcaagctgcgcgtgttcgatcagacg
gcgtcttcgactgtgcgctgccacacgcaggcggccaaccctctgtcacgaggagtgcgc
tgttctcgcgactacccagccgcaggaggcagcaccggcagacgtggccgtgggggtaaa
aggctcaagcaccaggagtcatctgaccagcacagctccatgggcctgaatgggaacctt
agagacctcagaaccggcacagctctcgggcccttcaacatggctctcggaccccagaca
agctcctcctcctggccatctgtgtgctcccaagccagcattcccgcagcccctttcgcc
cctggtatgcttccgatctaccccgtctacccaccactcgcacagccattaccagtcccc
gatccaatgcgtttcccggctacccagatggtgcctccccagatggtgcctccccagatg
gtgcctccccagatggtgcctcccatgatggccctcgttctgcccaactacatgttcccc
cagatgggtgcacccattgctcagccggccgccaaccccggacacttctacaatcctaac
tttacttaccctggcgccaccccagcggttgtccccacagctatttccaacccgatgccc
attccaccagtaacaggtgccccgtctcgtagcagcaccccccagtactacagtcagaca
cctgctgaccgcgagggggcagagtcccccctcttccagtcccgatgctcctcccctctc
aacttgttgcagcttgaggagtctcctagcaaccggttggaggtcgccacggcccatgct
acttcacagcaagctacaccttctgtgcagggaggtgcagctgggggacagagctcacct
aaccagaggagctctgatgacacttccaaggagaacgagaatggtgaaactaacgattcc
aaccaggatgccatgtccacatccagtgacctgctggatctgttactgcaggaagactcc
cgctcaggcactggctccgccgcttctgggtcaggatcctcaggcacgaggtcctcgggt
tctggctccggctccggctccaacggctgcagttcttctggcaccagcggcaccagcagc
agccagggcagccacaccagcaaatactttggtagtatcgactccttggagaacgaccac
acccgcaaacagccagcagggggcagcagcagcccgggtggagacggaggcgaggagcag
tttatcaagtgcgtcctgcaggatcccatctggctgctgatggccaacactgacgacaaa
gtcatgatgacgtatcagctgcctgtcagggacttggatacggtactgcgtgaggatcgt
gaggccctcaggaatatgcagaaacagcagccacgtttcacggaggaccagaagagagag
ctcagccaagtacacccctggatccgcacagggcgtctgccccgagccgtcaacatctct
ggttgtacaggctgcaagtctcccacctctgcgcctcccgccgccccgtttgacgtggag
atccacgagatggagctgtgcagtgtgctcaagtctcaggaagagggtgcagataaggcc
aagaaaaaccaatctgagacagccatggacgaaacccagcctgaggacgaagacgaggaa
gaggaggtcgaagagaaagaaaccaaaacacaagacagcaaccaagacatgacgacagag
gagcagagagagacctcggagtctgtcgcagtaaagtctaacgagtctgacatgactcac
tga

DBGET integrated database retrieval system